Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p15720 Brassica napus HOM05D008385 ORTHO05D010806 3.1e-99 365.2 189 100.0
BolC8t49088H Brassica oleracea HOM05D008385 ORTHO05D010806 4.4e-69 265.0 143 94.4
BolC8t49089H Brassica oleracea HOM05D008385 ORTHO05D010806 2.2e-68 262.7 143 93.7
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 2.1e-47 193.0 188 55.9
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 1.1e-46 190.7 188 55.3
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 1.4e-46 190.3 188 55.3
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 1.8e-46 189.9 184 58.2
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 2.4e-46 189.5 188 56.4
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 5.2e-46 188.3 183 56.3
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 2.0e-45 186.4 188 55.3
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 7.8e-42 174.5 191 50.3
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 1.5e-40 170.2 185 50.3
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.6e-40 168.3 189 51.9
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 1.6e-39 166.8 191 49.7
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 3.1e-38 162.5 185 48.6
BcaC09g50995 Brassica carinata HOM05D008385 ORTHO05D010806 6.9e-38 161.4 158 51.9
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 9.0e-38 161.0 183 49.7
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 7.6e-37 157.9 189 44.4
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 1.4e-35 153.7 175 48.6
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 9.3e-35 151.0 189 42.9
Thhalv10009564m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.1e-34 149.8 189 48.1
Thhalv10010004m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 7.8e-34 147.9 188 47.3
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 3.9e-33 145.6 189 42.3
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 2.1e-31 139.8 184 45.7
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 2.8e-31 139.4 190 41.1
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 3.6e-31 139.0 186 46.2
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 9.0e-30 134.4 190 42.1
Thhalv10019766m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.2e-29 134.0 175 46.9
Thhalv10027044m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.3e-28 130.6 183 42.6
Carub.0002s0689 Capsella rubella HOM05D008385 ORTHO05D010806 6.0e-26 121.7 156 46.2
AT1G50325 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 3.3e-24 115.9 191 37.7
Carub.0008s1111 Capsella rubella HOM05D008385 ORTHO05D010806 4.8e-23 112.1 194 38.1
Carub.0008s1110 Capsella rubella HOM05D008385 ORTHO05D010806 2.2e-20 103.2 194 35.1
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 2.5e-19 99.8 196 33.2
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 5.5e-19 98.6 186 37.6
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 6.0e-18 95.1 186 34.9
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.5e-16 89.7 159 37.7
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 2.8e-15 86.3 180 35.6
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 2.4e-14 83.2 129 38.8
BcaB03g13260 Brassica carinata HOM05D008385 ORTHO05D010806 9.0e-14 81.3 101 44.6
Carub.0001s2747 Capsella rubella HOM05D008385 ORTHO05D010806 2.6e-13 79.7 130 38.5
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.4e-11 73.9 145 33.8
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 4.2e-11 72.4 138 39.9
Carub.0007s3098 Capsella rubella HOM05D008385 ORTHO05D010806 5.5e-11 72.0 98 44.9
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 1.2e-10 70.9 131 35.9
BcaC07g38659 Brassica carinata HOM05D008385 ORTHO05D010806 3.0e-09 66.2 85 41.2
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 1.1e-08 64.3 132 36.4
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.4e-06 57.4 170 25.9


User provided reference genes

Program Settings