Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p14880 Brassica napus HOM05D010395 ORTHO05D012583 8.5e-67 256.9 134 100.0
BraA08t33471Z Brassica rapa HOM05D010395 ORTHO05D012583 8.5e-67 256.9 134 100.0
BcaC01g00670 Brassica carinata HOM05D010395 ORTHO05D012583 1.3e-59 233.0 134 92.5
C03p82940 Brassica napus HOM05D010395 ORTHO05D012583 1.3e-59 233.0 134 92.5
BolC3t20577H Brassica oleracea HOM05D010395 ORTHO05D012583 1.3e-59 233.0 134 92.5
BcaB03g11673 Brassica carinata HOM05D010395 ORTHO05D012583 1.2e-49 199.9 134 82.1
Sp7g18780 Schrenkiella parvula HOM05D010395 ORTHO05D012583 4.4e-39 164.9 139 68.3
A01p12110 Brassica napus HOM05D010395 ORTHO05D012583 1.1e-34 150.2 140 61.4
BraA01t01154Z Brassica rapa HOM05D010395 ORTHO05D012583 1.1e-34 150.2 140 61.4
BolC1t01399H Brassica oleracea HOM05D010395 ORTHO05D012583 1.6e-33 146.4 140 60.7
AL7G33470 Arabidopsis lyrata HOM05D010395 ORTHO05D012583 1.2e-31 140.2 145 62.8
A03p52430 Brassica napus HOM05D010395 ORTHO05D012583 1.2e-31 140.2 140 57.9
C07p50890 Brassica napus HOM05D010395 ORTHO05D012583 1.5e-31 139.8 140 57.9
BolC7t45587H Brassica oleracea HOM05D010395 ORTHO05D012583 1.5e-31 139.8 140 57.9
BraA03t14322Z Brassica rapa HOM05D010395 ORTHO05D012583 4.4e-31 138.3 140 57.1
C01p14420 Brassica napus HOM05D010395 ORTHO05D012583 1.3e-30 136.7 140 58.6
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.9e-30 134.8 145 60.7
AT4G20420 Arabidopsis thaliana HOM05D010395 ORTHO05D012583 8.3e-30 134.0 145 57.9
Carub.0007s2074 Capsella rubella HOM05D010395 ORTHO05D012583 7.0e-29 131.0 143 56.6
CARHR227250 Cardamine hirsuta HOM05D010395 ORTHO05D012583 3.1e-24 115.5 145 55.2
Thhalv10026545m.g Eutrema salsugineum HOM05D010395 ORTHO05D012583 8.9e-24 114.0 135 51.9
CARHR178570 Cardamine hirsuta HOM05D009819 ORTHO05D011938 9.2e-13 77.4 130 43.1
Sp2g09330 Schrenkiella parvula HOM05D009819 ORTHO05D011938 2.3e-11 72.8 75 52.0
Thhalv10001188m.g Eutrema salsugineum HOM05D009819 ORTHO05D011938 3.9e-11 72.0 92 47.8
BcaC06g31608 Brassica carinata HOM05D009819 ORTHO05D011938 1.1e-10 70.5 115 44.3
BcaB07g30520 Brassica carinata HOM05D009819 ORTHO05D011938 1.9e-10 69.7 125 40.8
Carub.0008s0396 Capsella rubella HOM05D009819 ORTHO05D011938 1.9e-10 69.7 92 45.7
C07p27410 Brassica napus HOM05D009819 ORTHO05D011938 4.3e-10 68.6 90 47.8
BolC7t43271H Brassica oleracea HOM05D009819 ORTHO05D011938 4.3e-10 68.6 90 47.8
THA.LOC104812932 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 7.3e-10 67.8 132 38.6
BcaC06g34541 Brassica carinata HOM05D009819 ORTHO05D011938 9.6e-10 67.4 90 46.7
A02p28450 Brassica napus HOM05D009819 ORTHO05D011938 3.6e-09 65.5 94 43.6
BraA02t07880Z Brassica rapa HOM05D009819 ORTHO05D011938 3.6e-09 65.5 94 43.6
BolC2t10545H Brassica oleracea HOM05D009819 ORTHO05D011938 6.2e-09 64.7 91 42.9
A06p47110 Brassica napus HOM05D009819 ORTHO05D011938 2.4e-08 62.8 102 43.1
BraA06t27583Z Brassica rapa HOM05D009819 ORTHO05D011938 2.4e-08 62.8 102 43.1
A09p21160 Brassica napus HOM05D009819 ORTHO05D011938 3.1e-08 62.4 97 44.3
BraA09t37722Z Brassica rapa HOM05D009819 ORTHO05D011938 3.1e-08 62.4 97 44.3
AT5G44540 Arabidopsis thaliana HOM05D009819 ORTHO05D011938 6.8e-08 61.2 130 40.0
BcaNung05679 Brassica carinata HOM05D010395 ORTHO05D012583 2.0e-07 59.7 53 64.2
BcaC04g21826 Brassica carinata HOM05D009819 ORTHO05D011938 3.4e-07 58.9 106 41.5
C09p26990 Brassica napus HOM05D009819 ORTHO05D011938 3.4e-07 58.9 106 41.5
BolC9t55582H Brassica oleracea HOM05D009819 ORTHO05D011938 3.4e-07 58.9 106 41.5
BcaB07g30942 Brassica carinata HOM05D009819 ORTHO05D011938 6.4e-06 54.7 97 43.3


User provided reference genes

Program Settings