Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p12830 Brassica napus HOM05D000042 ORTHO05D103464 3.7e-76 288.1 143 100.0
A06p01180 Brassica napus HOM05D000042 ORTHO05D020036 5.8e-13 78.2 71 64.8
C06p08840 Brassica napus HOM05D000042 ORTHO05D020036 9.2e-11 70.9 39 92.3
BraA06t23345Z Brassica rapa HOM05D000042 ORTHO05D020036 1.2e-10 70.5 75 58.7
BcaB02g08318 Brassica carinata HOM05D000042 ORTHO05D000028 1.2e-07 60.5 39 76.9
A04p03160 Brassica napus HOM05D000042 ORTHO05D000028 1.2e-07 60.5 39 76.9
C04p35030 Brassica napus HOM05D000042 ORTHO05D000028 1.2e-07 60.5 39 76.9
BolC4t25060H Brassica oleracea HOM05D000042 ORTHO05D000028 1.2e-07 60.5 39 76.9
BraA04t16037Z Brassica rapa HOM05D000042 ORTHO05D000028 1.2e-07 60.5 39 76.9
BcaC02g09933 Brassica carinata HOM05D000042 ORTHO05D000028 4.7e-07 58.5 39 74.4
BcaB02g07609 Brassica carinata HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BcaC07g40392 Brassica carinata HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BcaC08g44836 Brassica carinata HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
A07p23370 Brassica napus HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
A09p50280 Brassica napus HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
C06p24440 Brassica napus HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
C08p32790 Brassica napus HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BolC6t37591H Brassica oleracea HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BolC8t50890H Brassica oleracea HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BraA07t30002Z Brassica rapa HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
BraA09t40479Z Brassica rapa HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
CARHR167580 Cardamine hirsuta HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
PGR004G1335 Punica granatum HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 71.8
Sp5g05210 Schrenkiella parvula HOM05D000042 ORTHO05D000028 6.2e-07 58.2 39 74.4
Aa31LG10G12220 Aethionema arabicum HOM05D000042 ORTHO05D000028 8.1e-07 57.8 39 71.8
Sed0024257 Sechium edule HOM05D000042 ORTHO05D000028 1.1e-06 57.4 39 69.2
ClCG04G003520 Citrullus lanatus HOM05D000042 ORTHO05D000028 1.4e-06 57.0 39 66.7
MELO3C019192.2 Cucumis melo HOM05D000042 ORTHO05D000028 1.4e-06 57.0 39 66.7
CsaV3_4G028880 Cucumis sativus L. HOM05D000042 ORTHO05D000028 1.4e-06 57.0 39 66.7
AL5G38920 Arabidopsis lyrata HOM05D000042 ORTHO05D000028 1.8e-06 56.6 89 46.1
Carub.0005s2423 Capsella rubella HOM05D000042 ORTHO05D000028 1.8e-06 56.6 39 71.8
THA.LOC104817587 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 1.8e-06 56.6 80 46.2
AT3G57390 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 2.4e-06 56.2 39 69.2
A02p14910 Brassica napus HOM05D023592 ORTHO05D101418 2.4e-06 56.2 44 63.6
A03p66280 Brassica napus HOM05D000042 ORTHO05D027069 2.4e-06 56.2 41 65.9
BraA03t15683Z Brassica rapa HOM05D000042 ORTHO05D027069 2.4e-06 56.2 41 65.9
THA.LOC104804844 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 3.1e-06 55.8 39 69.2
CiPaw.09G039300 Carya illinoinensis HOM05D000042 ORTHO05D000028 4.0e-06 55.5 93 41.9
FvH4_7g01720 Fragaria vesca HOM05D000042 ORTHO05D000028 4.0e-06 55.5 97 37.1
FAN06G4485 Fragaria x ananassa HOM05D000042 ORTHO05D000028 4.0e-06 55.5 97 37.1
Gohir.D11G329600 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.0e-06 55.5 87 39.1
Hma1.2p1_0788F.1_g218070 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 4.0e-06 55.5 39 69.2
Lju124C44T12 Lonicera japonica HOM05D000042 ORTHO05D000028 4.0e-06 55.5 39 69.2
Lalb_Chr21g0316521 Lupinus albus HOM05D000042 ORTHO05D000028 4.0e-06 55.5 39 66.7
Oeu051415.1 Olea europaea HOM05D000042 ORTHO05D000028 5.2e-06 55.1 39 64.1
COL.COLO4_20029 Corchorus olitorius HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 66.7
Duzib093G0336 Durio zibethinus HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 66.7
FAN01G3037 Fragaria x ananassa HOM05D000042 ORTHO05D000028 6.8e-06 54.7 121 33.1
Gohir.A02G107301 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 66.7
Gorai.007G360800 Gossypium raimondii HOM05D000042 ORTHO05D000028 6.8e-06 54.7 87 39.1
HanXRQChr10g0299591 Helianthus annuus HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 69.2
Medtr1g053070 Medicago truncatula HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 64.1
Peaxi162Scf00130g00423 Petunia axillaris HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 66.7
Thecc.05G150100 Theobroma cacao HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 66.7
GSVIVG01033253001 Vitis vinifera HOM05D000042 ORTHO05D000028 6.8e-06 54.7 39 64.1
Ah.10g038550 Amaranthus hybridus HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
EL10Ac2g04380 Beta vulgaris HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
CSS0023376 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 66.7
CSS0039724 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 66.7
Cpa.g.c33612 Carica papaya HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
Cc06_g17700 Coffea canephora HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 66.7
Duzib128G0515 Durio zibethinus HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
FAN03G2904 Fragaria x ananassa HOM05D000042 ORTHO05D000028 8.9e-06 54.3 97 37.1
Glyma.02G185500 Glycine max HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
Lsat_1_v5_gn_9_31261 Lactuca sativa HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 69.2
Lj5g0007892 Lotus japonicus HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
Phvul.007G251600 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
Psat6g113320 Pisum sativum HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
QL07p001582 Quercus lobata HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
TWI53G0011 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1
TWI77G0779 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 8.9e-06 54.3 39 64.1


User provided reference genes

Program Settings