Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 6.3e-123 444.1 225 100.0
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 6.3e-123 444.1 225 100.0
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 4.4e-116 421.4 225 94.2
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.6e-110 401.7 226 88.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 4.4e-108 394.8 228 86.4
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.2e-107 392.5 224 87.1
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 3.1e-106 388.7 225 86.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 5.4e-106 387.9 227 85.9
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.5e-105 385.2 224 84.8
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 4.5e-105 384.8 228 83.8
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 6.8e-101 370.9 198 93.9
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 3.4e-92 342.0 224 78.1
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.3e-91 340.1 227 74.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.7e-91 339.7 227 75.8
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.2e-91 339.3 222 74.8
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.9e-91 339.0 225 76.4
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 8.3e-91 337.4 228 74.1
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.4e-90 336.7 227 75.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 9.2e-90 334.0 221 74.2
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 9.2e-90 334.0 223 74.0
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.6e-89 333.2 220 75.5
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.0e-89 332.8 222 74.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 4.6e-89 331.6 218 74.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 6.0e-89 331.3 224 73.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 6.0e-89 331.3 228 72.4
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 7.8e-89 330.9 234 70.5
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.3e-88 330.1 227 71.4
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 3.0e-88 328.9 213 76.5
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.0e-88 328.9 220 73.6
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.9e-88 328.6 224 71.9
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 3.9e-88 328.6 221 72.4
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.9e-88 328.6 221 73.3
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 8.6e-88 327.4 231 71.9
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 8.6e-88 327.4 227 71.8
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.5e-87 326.6 221 72.9
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.5e-87 325.9 221 71.5
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.3e-87 325.1 220 73.6
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 7.3e-87 324.3 224 72.3
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 9.5e-87 323.9 224 71.9
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.2e-86 323.6 227 69.6
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.6e-86 323.2 220 72.3
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 2.1e-86 322.8 226 70.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 4.7e-86 321.6 221 70.1
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 8.1e-86 320.9 222 71.2
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 8.1e-86 320.9 221 70.1
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 8.1e-86 320.9 226 69.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 8.1e-86 320.9 220 71.4
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.8e-85 319.7 220 70.9
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.8e-85 319.7 238 66.8
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.3e-85 319.3 228 68.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 2.3e-85 319.3 223 70.4
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 3.1e-85 318.9 223 70.4
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 3.1e-85 318.9 260 63.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 4.0e-85 318.5 228 68.9
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 8.9e-85 317.4 224 69.6
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.2e-84 317.0 230 68.7
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.5e-84 316.6 229 69.4
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.5e-84 316.6 222 71.6
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.4e-84 315.5 228 71.5
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.8e-84 313.9 227 70.0
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 9.8e-84 313.9 229 69.9
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.3e-83 313.5 224 70.5
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.7e-83 313.2 229 68.1
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.7e-83 313.2 231 67.5
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.2e-83 312.8 231 68.0
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 4.9e-83 311.6 223 68.2
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.4e-83 311.2 227 69.2
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 8.3e-83 310.8 235 67.7
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 8.3e-83 310.8 224 70.1
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.4e-82 309.3 236 66.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.1e-82 308.5 253 64.0
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 7.1e-82 307.8 237 65.4
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.6e-81 306.6 181 78.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.3e-80 303.5 221 68.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.3e-80 303.5 218 70.6
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.7e-80 303.1 226 67.7
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 6.6e-80 301.2 267 61.0
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.5e-79 300.1 221 68.3
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.9e-79 299.7 215 69.3
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.5e-79 299.3 226 65.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 5.6e-79 298.1 175 78.9
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 5.6e-79 298.1 216 69.0
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 4.7e-78 295.0 186 72.6
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.1e-77 293.9 295 56.3
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.7e-75 286.6 229 64.2
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 2.4e-74 282.7 200 69.0
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 5.4e-74 281.6 285 55.1
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 8.6e-72 274.2 221 60.6
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.9e-71 273.1 230 62.6
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.3e-71 272.3 223 65.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 6.8e-69 264.6 160 76.2
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.4e-68 262.3 189 65.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.8e-67 258.8 178 67.4
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 6.4e-67 258.1 229 59.8
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.9e-66 256.5 184 65.8
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 3.9e-64 248.8 238 56.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 3.9e-64 248.8 377 41.4
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 2.5e-63 246.1 182 69.8
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.2e-62 241.5 183 65.0
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 8.4e-59 231.1 185 58.4
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 8.7e-56 221.1 223 54.7
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 9.3e-50 201.1 150 71.3
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.5e-47 193.0 230 43.0
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.7e-46 189.1 158 63.3
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 6.2e-46 188.3 148 66.9
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.6e-44 183.0 133 72.9
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.6e-44 183.0 133 72.9
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 3.7e-38 162.5 161 54.7
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 9.0e-37 157.9 182 42.9
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 5.0e-35 152.1 150 59.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 4.2e-34 149.1 150 58.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 7.2e-34 148.3 223 39.9
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.3e-31 139.4 136 58.8
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 7.4e-23 111.7 139 46.8
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 2.6e-20 103.2 78 62.8
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.0e-19 101.3 103 57.3
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 6.5e-19 98.6 91 61.5
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.4e-18 97.4 54 77.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 4.8e-14 82.4 98 52.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 7.0e-13 78.6 95 53.7
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 1.9e-10 70.5 45 66.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.6e-09 66.2 53 58.5


User provided reference genes

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