Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p12530 Brassica napus HOM05D030867 ORTHO05D027735 5.1e-60 234.2 115 100.0
BraA08t33242Z Brassica rapa HOM05D030867 ORTHO05D027735 5.1e-60 234.2 115 100.0
BolC8t48375H Brassica oleracea HOM05D030867 ORTHO05D027735 2.5e-59 231.9 115 99.1
BcaC07g37992 Brassica carinata HOM05D030867 ORTHO05D027735 1.6e-21 106.3 55 92.7
Sp7g15060 Schrenkiella parvula HOM05D000519 ORTHO05D016725 2.4e-17 92.4 114 46.5
BcaNung02871 Brassica carinata HOM05D000519 ORTHO05D016725 4.1e-17 91.7 114 42.1
BcaC06g33484 Brassica carinata HOM05D000519 ORTHO05D016725 9.0e-17 90.5 114 41.2
BcaC06g33485 Brassica carinata HOM05D000519 ORTHO05D016725 9.0e-17 90.5 114 41.2
C07p47950 Brassica napus HOM05D000519 ORTHO05D016725 9.0e-17 90.5 114 41.2
BolC7t45318H Brassica oleracea HOM05D000519 ORTHO05D016725 9.0e-17 90.5 114 41.2
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 2.0e-16 89.4 113 42.5
A03p49900 Brassica napus HOM05D000519 ORTHO05D016725 2.0e-16 89.4 114 43.0
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 2.0e-16 89.4 113 42.5
BraA03t14084Z Brassica rapa HOM05D000519 ORTHO05D016725 2.0e-16 89.4 114 43.0
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 4.5e-16 88.2 113 42.5
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 4.5e-16 88.2 113 42.5
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 3.8e-15 85.1 113 40.7
BcaNung00187 Brassica carinata HOM05D000519 ORTHO05D000959 9.4e-14 80.5 113 39.8
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 1.6e-13 79.7 116 39.7
A01p20960 Brassica napus HOM05D000519 ORTHO05D000959 6.1e-13 77.8 117 40.2
BraA01t02013Z Brassica rapa HOM05D000519 ORTHO05D000959 6.1e-13 77.8 117 40.2
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 7.9e-13 77.4 116 38.8
C01p26260 Brassica napus HOM05D000519 ORTHO05D000959 1.0e-12 77.0 112 39.3
CARHR222900 Cardamine hirsuta HOM05D000519 ORTHO05D000959 1.8e-12 76.3 113 38.9
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 2.3e-12 75.9 112 38.4
Thhalv10026611m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 3.0e-12 75.5 113 37.2
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 5.1e-12 74.7 113 41.6
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 8.8e-12 73.9 113 38.9
Aa31LG3G7160 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.3e-10 70.1 109 37.6
A03p42900 Brassica napus HOM05D000519 ORTHO05D000959 2.8e-10 68.9 108 40.7
Aa31LG3G7150 Aethionema arabicum HOM05D000519 ORTHO05D000959 4.8e-10 68.2 109 35.8
Aa31LG9G7000 Aethionema arabicum HOM05D000519 ORTHO05D000959 6.3e-10 67.8 113 34.5
Aa31LG9G7070 Aethionema arabicum HOM05D000519 ORTHO05D000959 6.9e-09 64.3 100 39.0
Aa31LG7G5010 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.2e-08 63.5 83 42.2
A01p20920 Brassica napus HOM05D000519 ORTHO05D000959 1.2e-08 63.5 113 36.3
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 1.5e-08 63.2 98 40.8
Aa31sc265G20 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.6e-08 62.4 75 44.0
C01p26280 Brassica napus HOM05D020523 ORTHO05D000959 2.6e-08 62.4 99 36.4
BolC1t02574H Brassica oleracea HOM05D020523 ORTHO05D000959 2.6e-08 62.4 99 36.4
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.6e-08 62.4 111 37.8
RcHm_v2.0_Chr3g0455001 Rosa chinensis HOM05D000519 ORTHO05D000959 3.4e-08 62.0 110 30.0
Aa31LG2G12590 Aethionema arabicum HOM05D000519 ORTHO05D000959 7.7e-08 60.8 106 38.7
BcaC09g50358 Brassica carinata HOM05D020523 ORTHO05D000959 7.7e-08 60.8 98 35.7
BcaNung00188 Brassica carinata HOM05D000519 ORTHO05D000959 1.0e-07 60.5 112 31.2
A03p42880 Brassica napus HOM05D000519 ORTHO05D000959 1.0e-07 60.5 116 38.8
BraA03t13434Z Brassica rapa HOM05D000519 ORTHO05D000959 1.0e-07 60.5 116 38.8
A01p20970 Brassica napus HOM05D020523 ORTHO05D000959 1.7e-07 59.7 99 35.4
BcaB03g14656 Brassica carinata HOM05D000519 ORTHO05D000959 2.2e-07 59.3 108 36.1
Ah.14g087560 Amaranthus hybridus HOM05D000519 ORTHO05D000959 2.9e-07 58.9 99 33.3
Aa31LG3G7170 Aethionema arabicum HOM05D000519 ORTHO05D000959 3.8e-07 58.5 68 44.1
BraA01t02014Z Brassica rapa HOM05D020523 ORTHO05D000959 3.8e-07 58.5 99 34.3
AUR62012807 Chenopodium quinoa HOM05D000519 ORTHO05D000959 8.5e-07 57.4 114 32.5
RcHm_v2.0_Chr5g0010271 Rosa chinensis HOM05D000519 ORTHO05D000959 8.5e-07 57.4 111 30.6
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 8.5e-07 57.4 99 35.4
Aa31LG2G12580 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.1e-06 57.0 74 39.2
C01p26270 Brassica napus HOM05D000519 ORTHO05D000959 1.4e-06 56.6 88 35.2
Potri.006G014500 Populus trichocarpa HOM05D000519 ORTHO05D000959 1.4e-06 56.6 114 29.8
Manes.09G039400 Manihot esculenta HOM05D000519 ORTHO05D000959 1.9e-06 56.2 83 37.3
BcaNung02872 Brassica carinata HOM05D056382 ORTHO05D016725 2.5e-06 55.8 52 50.0
BcaNung02873 Brassica carinata HOM05D056382 ORTHO05D016725 2.5e-06 55.8 52 50.0
BcaB04g19211 Brassica carinata HOM05D000519 ORTHO05D000959 4.2e-06 55.1 119 35.3
AUR62021845 Chenopodium quinoa HOM05D000519 ORTHO05D000959 4.2e-06 55.1 111 30.6
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 4.2e-06 55.1 114 31.6
CAN.G64.24 Capsicum annuum HOM05D000519 ORTHO05D000959 5.5e-06 54.7 110 28.2
Ca_21040_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 5.5e-06 54.7 95 33.7
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 5.5e-06 54.7 109 33.0
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 5.5e-06 54.7 109 33.0
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 5.5e-06 54.7 96 38.5
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 7.2e-06 54.3 106 30.2
Psat7g244200 Pisum sativum HOM05D000519 ORTHO05D000959 7.2e-06 54.3 104 28.8
AUR62021846 Chenopodium quinoa HOM05D000519 ORTHO05D000959 9.4e-06 53.9 114 31.6
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 9.4e-06 53.9 89 32.6
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 9.4e-06 53.9 114 31.6


User provided reference genes

Program Settings