Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 0.0e+00 2831.2 1481 100.0
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 0.0e+00 2797.7 1481 99.0
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 0.0e+00 2746.5 1470 96.2
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 2726.8 1455 96.6
BcaB04g18275 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 2638.2 1458 93.1
AL7G40850 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 0.0e+00 2405.9 1462 86.0
Thhalv10024215m.g Eutrema salsugineum HOM05D007170 ORTHO05D009243 0.0e+00 2399.8 1462 86.0
AT4G14970 Arabidopsis thaliana HOM05D007170 ORTHO05D009243 0.0e+00 2382.8 1461 85.1
Prupe.3G191100 Prunus persica HOM05D007170 ORTHO05D009243 0.0e+00 1585.1 1446 60.4
Cfa020492 Carpinus fangiana HOM05D007170 ORTHO05D009243 0.0e+00 1584.7 1445 59.3
TAR626G1158 Trochodendron aralioides HOM05D007170 ORTHO05D009243 0.0e+00 1574.7 1454 58.9
Sabra06G0017000 Salix brachista HOM05D007170 ORTHO05D009243 0.0e+00 1570.4 1461 59.1
Potri.006G023500 Populus trichocarpa HOM05D007170 ORTHO05D009243 0.0e+00 1565.1 1448 59.0
Haze_09546 Corylus avellana HOM05D007170 ORTHO05D009243 0.0e+00 1560.0 1490 57.7
Atru.chr8.950 Acer truncatum HOM05D007170 ORTHO05D009243 0.0e+00 1557.7 1448 58.6
RcHm_v2.0_Chr2g0154431 Rosa chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1557.0 1430 59.8
Duzib138G0290 Durio zibethinus HOM05D007170 ORTHO05D009243 0.0e+00 1549.3 1452 59.1
MD09G1135500 Malus domestica HOM05D007170 ORTHO05D009243 0.0e+00 1541.6 1443 58.4
FvH4_6g39900 Fragaria vesca HOM05D007170 ORTHO05D009243 0.0e+00 1533.9 1428 59.2
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 0.0e+00 1523.5 1467 56.9
Gohir.D07G192100 Gossypium hirsutum HOM05D007170 ORTHO05D009243 0.0e+00 1512.3 1454 58.1
CANSAT64G1590 Cannabis sativa HOM05D007170 ORTHO05D009243 0.0e+00 1509.6 1456 57.5
Nn3g20634 Nelumbo nucifera HOM05D007170 ORTHO05D009243 0.0e+00 1508.8 1430 57.8
Actinidia06806 Actinidia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1508.4 1433 56.9
Gorai.001G214900 Gossypium raimondii HOM05D007170 ORTHO05D009243 0.0e+00 1506.9 1454 58.2
CiPaw.03G198500 Carya illinoinensis HOM05D007170 ORTHO05D009243 0.0e+00 1505.0 1423 57.6
Ciclev10010909m.g Citrus clementina HOM05D007170 ORTHO05D009243 0.0e+00 1486.9 1376 58.9
FAN14G4936 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1484.5 1452 57.3
FAN02G4004 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1484.2 1456 57.3
Manes.09G075018 Manihot esculenta HOM05D007170 ORTHO05D009243 0.0e+00 1478.4 1466 54.9
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 0.0e+00 1466.8 1356 59.4
MBI02_g15149_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 0.0e+00 1426.4 1513 54.1
PGR031G3275 Punica granatum HOM05D007170 ORTHO05D009243 0.0e+00 1421.0 1449 54.7
DCAR_006644 Daucus carota HOM05D007170 ORTHO05D009243 0.0e+00 1409.4 1467 53.8
PSO541G2476 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1397.1 1461 53.0
PSO675G2674 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1389.4 1456 53.0
HanXRQChr10g0314771 Helianthus annuus HOM05D007170 ORTHO05D009243 0.0e+00 1385.9 1452 53.5
Lsat_1_v5_gn_2_66140 Lactuca sativa HOM05D007170 ORTHO05D009243 0.0e+00 1382.1 1455 52.7
Eucgr.A00891 Eucalyptus grandis HOM05D007170 ORTHO05D009243 0.0e+00 1370.5 1459 53.4
Sopen01g040790 Solanum pennellii HOM05D007170 ORTHO05D009243 0.0e+00 1370.1 1435 52.8
Solyc01g097110.2 Solanum lycopersicum HOM05D007170 ORTHO05D009243 0.0e+00 1364.7 1435 52.7
Aqoxy3G00362 Aquilegia oxysepala HOM05D007170 ORTHO05D009243 0.0e+00 1362.8 1461 53.1
Sc07g0002130 Simmondsia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1362.4 1413 53.6
Nitab4.5_0002247g0080 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1350.9 1465 51.7
Cc02_g31000 Coffea canephora HOM05D007170 ORTHO05D009243 0.0e+00 1345.1 1454 52.7
Peaxi162Scf00647g00012 Petunia axillaris HOM05D007170 ORTHO05D009243 0.0e+00 1330.5 1482 51.1
ATR1098G002 Amborella trichopoda HOM05D007170 ORTHO05D009243 0.0e+00 1306.2 1453 50.7
CSS0034103 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 0.0e+00 1272.3 1205 57.4
Nitab4.5_0005905g0020 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1266.1 1489 49.4
Cpa.g.sc8.299 Carica papaya HOM05D007170 ORTHO05D009243 0.0e+00 1239.6 1458 50.1
SalBow8G4071 Salvia bowleyana HOM05D007170 ORTHO05D009243 0.0e+00 1232.2 1531 47.5
SGA_v2.0_scaffold172G38980 Striga asiatica HOM05D007170 ORTHO05D009243 0.0e+00 1218.4 1552 46.7
ECA238G4341 Erigeron canadensis HOM05D007170 ORTHO05D009243 0.0e+00 1216.4 1339 51.7
Oeu038464.1 Olea europaea HOM05D007170 ORTHO05D009243 0.0e+00 1207.2 1506 46.9
Lj7A482G28 Lonicera japonica HOM05D007170 ORTHO05D009243 0.0e+00 1126.3 1327 50.1
Zm00001eb117500 Zea mays HOM05D007170 ORTHO05D009243 8.8e-290 1001.1 1265 46.1
Migut.B01114 Erythranthe guttata HOM05D007170 ORTHO05D009243 7.7e-278 961.4 1202 47.8
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 7.8e-270 934.9 1241 44.2
Dinv20277 Davidia involucrata HOM05D007170 ORTHO05D009243 9.8e-265 917.9 756 63.9
Os07g0154400 Oryza sativa ssp. japonica HOM05D007170 ORTHO05D009243 9.8e-265 917.9 1059 49.5
CSS0006494 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 6.2e-259 898.7 971 53.1
Mapoly0001s0378 Marchantia polymorpha HOM05D007170 ORTHO05D009243 5.2e-258 895.6 1508 38.7
Pp3c3_20180 Physcomitrium patens HOM05D007170 ORTHO05D009243 2.9e-256 889.8 1460 38.2
CSS0002264 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 6.2e-251 872.1 970 52.0
Gohir.A07G185500 Gossypium hirsutum HOM05D007170 ORTHO05D009243 8.9e-242 841.6 919 53.2
CARHR221630 Cardamine hirsuta HOM05D007170 ORTHO05D009243 4.5e-201 706.4 405 89.9
Hma1.2p1_0892F.1_g233440 Hydrangea macrophylla HOM05D007170 ORTHO05D009243 6.7e-197 692.6 554 67.0
HPP92_019550 Vanilla planifolia HOM05D007170 ORTHO05D009243 2.0e-193 681.0 671 53.9
AagrBONN_evm.TU.Sc2ySwM_344.1322 Anthoceros agrestis HOM05D007170 ORTHO05D009243 7.7e-185 652.5 1217 35.3
CAN.G134.71 Capsicum annuum HOM05D007170 ORTHO05D009243 3.6e-174 617.1 538 59.7
Dinv20276 Davidia involucrata HOM05D007170 ORTHO05D009243 2.7e-161 574.3 628 51.4
CBR_g3147 Chara braunii HOM05D007170 ORTHO05D009243 3.2e-146 524.2 966 34.9
HPP92_019551 Vanilla planifolia HOM05D007170 ORTHO05D009243 9.5e-143 512.7 730 42.3
CARHR221660 Cardamine hirsuta HOM05D007170 ORTHO05D009243 1.2e-142 512.3 323 79.9
CAN.G134.69 Capsicum annuum HOM05D007170 ORTHO05D009243 2.1e-97 362.1 698 37.2
CARHR221670 Cardamine hirsuta HOM05D007170 ORTHO05D009243 4.9e-91 340.9 199 88.9
Dinv20273 Davidia involucrata HOM05D007170 ORTHO05D009243 1.1e-69 270.0 256 56.2
Gohir.A07G185533 Gossypium hirsutum HOM05D007170 ORTHO05D009243 1.1e-69 270.0 202 67.3
CARHR221650 Cardamine hirsuta HOM05D007170 ORTHO05D009243 8.5e-67 260.4 208 74.0
CARHR221640 Cardamine hirsuta HOM05D007170 ORTHO05D009243 8.2e-62 243.8 160 81.9
COL.COLO4_06563 Corchorus olitorius HOM05D007170 ORTHO05D009243 5.7e-47 194.5 122 75.4
CBR_g54165 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-46 193.0 234 43.2
SEGI_21897 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 8.6e-43 180.6 222 47.3
CDE07G1176 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 2.0e-39 169.5 149 61.1
QL08p022040 Quercus lobata HOM05D007170 ORTHO05D009243 1.7e-38 166.4 204 46.1
Cpa.g.sc8.300 Carica papaya HOM05D007170 ORTHO05D009243 4.5e-36 158.3 121 66.1
Zm00001eb046090 Zea mays HOM05D007170 ORTHO05D009243 8.3e-30 137.5 203 38.9
Dinv20272 Davidia involucrata HOM05D007170 ORTHO05D009243 1.2e-25 123.6 91 65.9
Carub.0007s2712 Capsella rubella HOM05D007170 ORTHO05D009243 3.6e-25 122.1 95 69.5
Zm00001eb031530 Zea mays HOM05D007170 ORTHO05D009243 1.3e-22 113.6 104 47.1
Zm00001eb010760 Zea mays HOM05D007170 ORTHO05D009243 1.4e-21 110.2 104 46.2
Zm00001eb442000 Zea mays HOM05D007170 ORTHO05D009243 1.4e-21 110.2 104 46.2
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 1.4e-16 93.6 213 33.3
MBI08_g17991_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 2.9e-14 85.9 79 60.8
Lj7A482T28 Lonicera japonica HOM05D007170 ORTHO05D009243 3.5e-12 79.0 121 42.1
GSVIVG01038387001 Vitis vinifera HOM05D007170 ORTHO05D009243 3.5e-12 79.0 51 76.5
AL3G45770 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 4.3e-10 72.0 43 81.4
C03p18330 Brassica napus HOM05D007170 ORTHO05D041508 9.6e-10 70.9 35 94.3
COL.COLO4_06564 Corchorus olitorius HOM05D007170 ORTHO05D009243 1.6e-09 70.1 119 42.9
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 2.1e-09 69.7 386 22.3
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 1.8e-08 66.6 405 22.0
CDE07G1841 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 4.0e-08 65.5 99 37.4
Zm00001eb008220 Zea mays HOM05D007170 ORTHO05D009243 4.0e-08 65.5 118 33.1
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 1.2e-07 63.9 384 23.7
GSVIVG01038403001 Vitis vinifera HOM05D007170 ORTHO05D009243 1.2e-07 63.9 40 75.0
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.5e-07 63.5 402 21.1
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 2.0e-07 63.2 402 20.9
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 2.0e-07 63.2 402 21.1
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 3.4e-07 62.4 413 24.0
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 4.4e-07 62.0 366 23.8
Cre10.g453650 Chlamydomonas reinhardtii HOM05D007170 ORTHO05D009243 7.6e-07 61.2 179 26.3
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 2.2e-06 59.7 403 21.6
Mapoly0008s0250 Marchantia polymorpha HOM05D003337 ORTHO05D003808 2.2e-06 59.7 401 21.2
BolC3t14231H Brassica oleracea HOM05D007170 ORTHO05D041508 6.4e-06 58.2 43 72.1


User provided reference genes

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