Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.8e-66 255.8 127 100.0
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 2.0e-65 252.3 127 98.4
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 5.8e-65 250.8 127 97.6
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 9.9e-65 250.0 125 98.4
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 7.3e-60 233.8 131 93.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 7.1e-55 217.2 135 85.9
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 3.0e-53 211.8 136 84.6
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 8.7e-53 210.3 136 83.8
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 8.7e-53 210.3 122 88.5
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 8.7e-53 210.3 127 85.0
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 9.6e-52 206.8 134 82.8
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 3.6e-51 204.9 120 85.8
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.1e-50 203.4 131 82.4
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 3.1e-50 201.8 123 86.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 3.4e-49 198.4 134 79.1
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 9.3e-47 190.3 121 79.3
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 3.5e-46 188.3 124 75.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.5e-46 188.3 121 78.5
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.6e-46 188.0 127 71.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 7.8e-46 187.2 132 75.0
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.5e-44 182.2 131 69.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 4.3e-44 181.4 135 71.1
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 7.3e-44 180.6 128 67.2
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 7.3e-44 180.6 102 80.4
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 7.3e-44 180.6 130 71.5
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 7.3e-44 180.6 104 79.8
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.3e-43 179.9 131 71.0
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 1.3e-43 179.9 102 81.4
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.3e-43 179.9 125 71.2
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.3e-43 179.9 105 81.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.6e-43 179.5 121 71.9
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.6e-43 179.5 121 71.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.6e-43 179.5 102 81.4
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 2.1e-43 179.1 131 68.7
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.1e-43 179.1 107 76.6
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.6e-43 178.3 118 74.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 6.2e-43 177.6 101 79.2
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.2e-43 177.6 121 71.1
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.1e-42 176.8 99 82.8
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.1e-42 176.8 99 82.8
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.8e-42 176.0 100 84.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.4e-42 175.6 99 81.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-42 175.6 102 79.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.4e-42 175.6 102 79.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.4e-42 175.6 106 78.3
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 2.4e-42 175.6 101 80.2
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 3.1e-42 175.3 101 79.2
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 5.3e-42 174.5 102 78.4
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 6.9e-42 174.1 102 81.4
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 6.9e-42 174.1 102 81.4
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 1.2e-41 173.3 99 83.8
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.2e-41 173.3 101 82.2
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.6e-41 172.2 121 71.9
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.6e-41 172.2 103 76.7
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 3.4e-41 171.8 128 68.8
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 3.4e-41 171.8 102 77.5
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 5.8e-41 171.0 95 82.1
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 5.8e-41 171.0 103 76.7
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 7.6e-41 170.6 125 68.8
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 9.9e-41 170.2 128 68.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.3e-40 169.9 101 80.2
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.7e-40 169.5 119 71.4
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 4.9e-40 167.9 102 75.5
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.4e-39 166.4 114 70.2
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.4e-39 166.4 122 65.6
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 3.2e-39 165.2 129 65.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 3.2e-39 165.2 131 65.6
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 4.2e-39 164.9 108 74.1
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 9.3e-39 163.7 115 72.2
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 9.3e-39 163.7 101 76.2
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.6e-38 162.9 101 78.2
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.6e-38 162.9 101 78.2
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.1e-38 162.5 127 66.9
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.7e-38 162.2 102 72.5
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.7e-38 162.2 121 68.6
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 2.7e-38 162.2 123 68.3
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.5e-38 161.8 97 77.3
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.5e-38 161.8 121 68.6
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 3.5e-38 161.8 131 64.9
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.0e-38 161.0 101 72.3
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.0e-37 160.2 128 64.8
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.3e-37 159.8 123 66.7
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.8e-37 159.5 90 81.1
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.8e-37 159.5 101 72.3
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.3e-37 159.1 120 65.0
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.1e-36 156.8 108 72.2
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.5e-36 156.4 115 67.0
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.9e-36 156.0 98 70.4
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 1.9e-36 156.0 113 70.8
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 4.3e-36 154.8 126 60.3
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 4.3e-36 154.8 103 73.8
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 9.6e-36 153.7 113 67.3
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 9.6e-36 153.7 100 70.0
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.1e-35 152.5 124 62.1
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.7e-35 151.8 147 57.1
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 4.8e-35 151.4 100 68.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.4e-34 149.8 101 71.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 2.4e-34 149.1 146 53.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 6.9e-34 147.5 177 48.6
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.5e-33 146.4 168 50.0
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 3.4e-33 145.2 131 57.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.4e-31 139.8 105 68.6
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 2.4e-31 139.0 126 58.7
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 5.5e-31 137.9 105 67.6
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 6.0e-30 134.4 78 80.8
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.1e-28 130.2 78 80.8
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.8e-26 122.9 70 88.6
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 4.0e-26 121.7 109 56.0
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 2.0e-25 119.4 114 54.4
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.4e-25 118.6 85 70.6
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 5.8e-25 117.9 68 83.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.3e-24 116.7 98 55.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.5e-22 108.6 68 73.5
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 7.9e-22 107.5 66 75.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 1.0e-21 107.1 61 80.3
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.9e-21 105.1 66 72.7
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.8e-18 96.3 96 54.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 4.5e-17 91.7 66 68.2
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 2.5e-15 85.9 99 43.4
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 5.5e-15 84.7 103 39.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.1e-14 82.8 98 37.8
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.0e-13 80.5 57 66.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.5e-12 75.9 90 35.6
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.7e-11 73.2 100 44.0
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.3e-08 63.5 63 55.6
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.1e-06 56.2 68 50.0


User provided reference genes

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