Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p10230 Brassica napus HOM05D000290 ORTHO05D007356 8.6e-84 313.5 151 100.0
CARHR208040 Cardamine hirsuta HOM05D000290 ORTHO05D007356 1.5e-32 143.3 112 68.8
Sp6g37630 Schrenkiella parvula HOM05D000290 ORTHO05D007356 2.6e-32 142.5 114 66.7
A03p02240 Brassica napus HOM05D000290 ORTHO05D007356 4.5e-32 141.7 115 67.0
BraA03t09588Z Brassica rapa HOM05D000290 ORTHO05D007356 4.5e-32 141.7 115 67.0
Carub.0006s0413 Capsella rubella HOM05D000290 ORTHO05D007356 4.5e-32 141.7 112 68.8
Thhalv10013198m.g Eutrema salsugineum HOM05D000290 ORTHO05D007356 1.7e-31 139.8 112 66.1
Aa31LG11G6040 Aethionema arabicum HOM05D000290 ORTHO05D007356 2.9e-31 139.0 112 67.0
AT5G05200 Arabidopsis thaliana HOM05D000290 ORTHO05D007356 2.9e-31 139.0 112 67.0
BolC9t59913H Brassica oleracea HOM05D000290 ORTHO05D007356 2.9e-31 139.0 114 64.9
BcaC06g32229 Brassica carinata HOM05D000290 ORTHO05D007356 3.8e-31 138.7 114 64.9
C09p71500 Brassica napus HOM05D000290 ORTHO05D007356 3.8e-31 138.7 114 64.9
BcaB01g05718 Brassica carinata HOM05D000290 ORTHO05D007356 1.1e-30 137.1 114 65.8
AL6G15040 Arabidopsis lyrata HOM05D000290 ORTHO05D007356 1.4e-30 136.7 112 65.2
BcaB01g05943 Brassica carinata HOM05D000290 ORTHO05D007356 1.4e-30 136.7 114 64.9
C03p02580 Brassica napus HOM05D000290 ORTHO05D007356 1.4e-30 136.7 114 64.9
BolC3t12810H Brassica oleracea HOM05D000290 ORTHO05D007356 1.4e-30 136.7 114 64.9
BraA10t45144Z Brassica rapa HOM05D000290 ORTHO05D007356 3.2e-30 135.6 114 64.0
A10p30990 Brassica napus HOM05D000290 ORTHO05D007356 4.2e-30 135.2 114 64.0
Duzib128G1704 Durio zibethinus HOM05D000290 ORTHO05D007356 3.3e-27 125.6 114 58.8
Duzib114G0405 Durio zibethinus HOM05D000290 ORTHO05D007356 9.7e-27 124.0 114 58.8
Gohir.A05G404300 Gossypium hirsutum HOM05D000290 ORTHO05D007356 9.7e-27 124.0 114 58.8
Gohir.D04G011400 Gossypium hirsutum HOM05D000290 ORTHO05D007356 9.7e-27 124.0 114 58.8
Gorai.012G013600 Gossypium raimondii HOM05D000290 ORTHO05D007356 9.7e-27 124.0 114 58.8
CAN.G1229.6 Capsicum annuum HOM05D000290 ORTHO05D007356 1.3e-26 123.6 114 60.5
COL.COLO4_19476 Corchorus olitorius HOM05D000290 ORTHO05D007356 1.3e-26 123.6 114 57.0
MD07G1235400 Malus domestica HOM05D000290 ORTHO05D007356 1.3e-26 123.6 114 57.9
Glyma.14G186700 Glycine max HOM05D000290 ORTHO05D007356 1.7e-26 123.2 115 57.4
HPP92_017912 Vanilla planifolia HOM05D000290 ORTHO05D007356 1.7e-26 123.2 118 55.1
arahy.Tifrunner.gnm1.ann1.FMIL5U Arachis hypogaea HOM05D000290 ORTHO05D007356 2.2e-26 122.9 115 58.3
arahy.Tifrunner.gnm1.ann1.S15XUX Arachis hypogaea HOM05D000290 ORTHO05D007356 2.2e-26 122.9 115 58.3
Haze_17371 Corylus avellana HOM05D000290 ORTHO05D007356 2.2e-26 122.9 112 58.9
Peaxi162Scf00073g02224 Petunia axillaris HOM05D000290 ORTHO05D007356 2.8e-26 122.5 114 59.6
Phvul.008G186400 Phaseolus vulgaris HOM05D000290 ORTHO05D007356 2.8e-26 122.5 115 56.5
vmacro06903 Vaccinium macrocarpon HOM05D000290 ORTHO05D007356 2.8e-26 122.5 112 57.1
Nitab4.5_0000171g0290 Nicotiana tabacum HOM05D000290 ORTHO05D007356 4.8e-26 121.7 114 60.5
Solyc03g095620.4 Solanum lycopersicum HOM05D000290 ORTHO05D007356 6.3e-26 121.3 114 58.8
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 6.3e-26 121.3 114 58.8
Cpa.g.sc19.40 Carica papaya HOM05D000290 ORTHO05D007356 8.2e-26 120.9 114 57.9
CiPaw.01G307500 Carya illinoinensis HOM05D000290 ORTHO05D007356 8.2e-26 120.9 114 58.8
TPR.G33928 Trifolium pratense HOM05D000290 ORTHO05D007356 8.2e-26 120.9 115 56.5
TAR623G1031 Trochodendron aralioides HOM05D000290 ORTHO05D007356 8.2e-26 120.9 114 60.5
Psat2g061840 Pisum sativum HOM05D000290 ORTHO05D007356 1.1e-25 120.6 115 56.5
PGSC0003DMG400022947 Solanum tuberosum HOM05D000290 ORTHO05D007356 1.1e-25 120.6 114 58.8
Thecc.10G185100 Theobroma cacao HOM05D000290 ORTHO05D007356 1.1e-25 120.6 114 57.0
Atru.chr12.193 Acer truncatum HOM05D000290 ORTHO05D007356 1.4e-25 120.2 114 57.9
AUR62024948 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.4e-25 120.2 114 58.8
ECA238G2935 Erigeron canadensis HOM05D000290 ORTHO05D007356 1.4e-25 120.2 114 57.0
Manes.07G142100 Manihot esculenta HOM05D000290 ORTHO05D007356 1.4e-25 120.2 112 56.2
Rhsim03G0153700 Rhododendron simsii HOM05D000290 ORTHO05D007356 1.4e-25 120.2 112 58.0
THA.LOC104823168 Tarenaya hassleriana HOM05D000290 ORTHO05D007356 1.4e-25 120.2 114 58.8
Aqoxy4G03280 Aquilegia oxysepala HOM05D000290 ORTHO05D007356 1.8e-25 119.8 112 57.1
CANSAT56G2455 Cannabis sativa HOM05D000290 ORTHO05D007356 1.8e-25 119.8 114 57.9
AUR62030591 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.8e-25 119.8 114 57.9
Cfa001193 Carpinus fangiana HOM05D000290 ORTHO05D007356 3.1e-25 119.0 112 57.1
Lalb_Chr10g0102831 Lupinus albus HOM05D000290 ORTHO05D007356 3.1e-25 119.0 115 55.7
Medtr5g068050 Medicago truncatula HOM05D000290 ORTHO05D007356 3.1e-25 119.0 115 56.5
TWI09G1541 Tripterygium wilfordii HOM05D000290 ORTHO05D007356 3.1e-25 119.0 114 56.1
Dinv34498 Davidia involucrata HOM05D000290 ORTHO05D007356 4.1e-25 118.6 112 55.4
Eucgr.G03148 Eucalyptus grandis HOM05D000290 ORTHO05D007356 4.1e-25 118.6 114 57.0
PSO170G6016 Papaver somniferum HOM05D000290 ORTHO05D007356 4.1e-25 118.6 112 55.4
PGR142G4431 Punica granatum HOM05D000290 ORTHO05D007356 5.3e-25 118.2 112 55.4
Oeu039386.1 Olea europaea HOM05D000290 ORTHO05D007356 6.9e-25 117.9 114 57.0
Migut.F01231 Erythranthe guttata HOM05D000290 ORTHO05D007356 9.1e-25 117.5 114 57.9
PSO017G3158 Papaver somniferum HOM05D000290 ORTHO05D007356 9.1e-25 117.5 112 53.6
Potri.019G061300 Populus trichocarpa HOM05D000290 ORTHO05D007356 9.1e-25 117.5 114 57.0
Os07g0227800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007356 1.2e-24 117.1 110 55.5
Ca_23242_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007356 1.5e-24 116.7 116 53.4
MD01G1169500 Malus domestica HOM05D000290 ORTHO05D007356 1.5e-24 116.7 114 55.3
QL08p065093 Quercus lobata HOM05D000290 ORTHO05D007356 1.5e-24 116.7 114 55.3
Ciclev10031187m.g Citrus clementina HOM05D000290 ORTHO05D007356 2.0e-24 116.3 112 57.1
LjContig00408g0018075 Lotus japonicus HOM05D000290 ORTHO05D007356 2.0e-24 116.3 116 53.4
Lj8A52T21 Lonicera japonica HOM05D000290 ORTHO05D007356 2.6e-24 115.9 114 56.1
Ah.12g064460 Amaranthus hybridus HOM05D000290 ORTHO05D007356 3.4e-24 115.5 114 56.1
Hma1.2p1_1805F.1_g303140 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 4.5e-24 115.2 114 54.4
Prupe.2G265700 Prunus persica HOM05D000290 ORTHO05D007356 4.5e-24 115.2 114 54.4
ATR1127G020 Amborella trichopoda HOM05D000290 ORTHO05D007356 7.7e-24 114.4 114 53.5
ClCG07G005270 Citrullus lanatus HOM05D000290 ORTHO05D007356 7.7e-24 114.4 112 54.5
Sed0001960 Sechium edule HOM05D000290 ORTHO05D007356 7.7e-24 114.4 112 54.5
Actinidia01008 Actinidia chinensis HOM05D000290 ORTHO05D007356 1.0e-23 114.0 114 55.3
HanXRQChr14g0460511 Helianthus annuus HOM05D000290 ORTHO05D007356 1.3e-23 113.6 114 54.4
EL10Ac2g02669 Beta vulgaris HOM05D000290 ORTHO05D007356 1.7e-23 113.2 114 54.4
CsaV3_5G011120 Cucumis sativus L. HOM05D000290 ORTHO05D007356 1.7e-23 113.2 112 53.6
FvH4_7g26150 Fragaria vesca HOM05D000290 ORTHO05D007356 2.9e-23 112.5 114 52.6
FAN06G0462 Fragaria x ananassa HOM05D000290 ORTHO05D007356 2.9e-23 112.5 114 52.6
FAN10G3915 Fragaria x ananassa HOM05D000290 ORTHO05D007356 2.9e-23 112.5 114 52.6
RcHm_v2.0_Chr1g0372581 Rosa chinensis HOM05D000290 ORTHO05D007356 2.9e-23 112.5 114 52.6
CSS0037983 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 3.8e-23 112.1 114 52.6
MELO3C020171.2 Cucumis melo HOM05D000290 ORTHO05D007356 3.8e-23 112.1 114 53.5
CSS0016279 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 5.0e-23 111.7 114 52.6
FAN01G0461 Fragaria x ananassa HOM05D000290 ORTHO05D007356 6.5e-23 111.3 114 51.8
GSVIVG01032656001 Vitis vinifera HOM05D000290 ORTHO05D007356 8.5e-23 110.9 110 54.5
Zm00001eb303700 Zea mays HOM05D000290 ORTHO05D007356 1.1e-22 110.5 112 51.8
Cc02_g05200 Coffea canephora HOM05D000290 ORTHO05D007356 2.5e-22 109.4 114 50.9
Sc10g0003060 Simmondsia chinensis HOM05D000290 ORTHO05D007356 2.5e-22 109.4 110 53.6
SGA_v2.0_scaffold160G37737 Striga asiatica HOM05D000290 ORTHO05D007356 5.5e-22 108.2 114 56.1
unitig_90.g27551 Utricularia gibba HOM05D000290 ORTHO05D007356 5.5e-22 108.2 112 55.4
Sabra19G0075100 Salix brachista HOM05D000290 ORTHO05D007356 2.7e-21 105.9 138 44.9
SEGI_22277 Sequoiadendron giganteum HOM05D000290 ORTHO05D007356 3.6e-21 105.5 115 49.6
Lsat_1_v5_gn_2_126721 Lactuca sativa HOM05D000290 ORTHO05D007356 6.1e-21 104.8 112 53.6
BolC5t30021H Brassica oleracea HOM05D000290 ORTHO05D007356 2.6e-19 99.4 78 65.4
BolC8t47473H Brassica oleracea HOM05D000290 ORTHO05D007356 3.3e-19 99.0 78 65.4
Nitab4.5_0005979g0040 Nicotiana tabacum HOM05D000290 ORTHO05D007356 4.8e-18 95.1 74 66.2
CDE04G3545 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 5.3e-17 91.7 113 47.8
Pp3c1_33470 Physcomitrium patens HOM05D000290 ORTHO05D007356 9.1e-17 90.9 113 47.8
C08p06270 Brassica napus HOM05D000290 ORTHO05D007356 1.2e-16 90.5 57 75.4
AagrBONN_evm.TU.Sc2ySwM_344.3768 Anthoceros agrestis HOM05D000290 ORTHO05D007356 7.7e-16 87.8 112 44.6
CBR_g39924 Chara braunii HOM05D000290 ORTHO05D007356 5.5e-14 81.6 116 38.8
A07p10010 Brassica napus HOM05D000290 ORTHO05D020024 7.2e-14 81.3 52 75.0
SMO361G0050 Selaginella moellendorffii HOM05D000290 ORTHO05D007356 7.2e-14 81.3 115 37.4
Mapoly0021s0153 Marchantia polymorpha HOM05D000290 ORTHO05D007356 9.4e-14 80.9 112 42.0
Glyma.02G219267 Glycine max HOM05D000290 ORTHO05D007356 8.8e-12 74.3 77 54.5
Cre09.g407801 Chlamydomonas reinhardtii HOM05D000290 ORTHO05D007356 2.6e-11 72.8 66 51.5
Hund13437 Selenicereus undatus HOM05D000290 ORTHO05D007356 2.6e-11 72.8 114 41.2
Actinidia07789 Actinidia chinensis HOM05D000290 ORTHO05D007356 3.7e-10 68.9 74 52.7
BcaC06g35134 Brassica carinata HOM05D019723 ORTHO05D020024 1.8e-09 66.6 54 59.3
SalBow2G1855 Salvia bowleyana HOM05D000290 ORTHO05D007356 3.1e-09 65.9 48 62.5
EL10Ac3g06530 Beta vulgaris HOM05D000290 ORTHO05D007356 2.0e-08 63.2 53 58.5
MCO04G093 Micromonas commoda HOM05D000290 ORTHO05D007356 2.0e-08 63.2 59 47.5
SEGI_34302 Sequoiadendron giganteum HOM05D003392 ORTHO05D003801 1.0e-07 60.8 57 52.6
C07p32840 Brassica napus HOM05D000290 ORTHO05D027172 1.9e-06 56.6 90 42.2
BolC7t43798H Brassica oleracea HOM05D000290 ORTHO05D027172 1.9e-06 56.6 90 42.2
CDE04G3455 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 4.2e-06 55.5 68 45.6


User provided reference genes

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