Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-177 625.9 379 100.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 8.1e-147 524.2 378 88.4
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 6.0e-126 454.9 325 90.5
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-121 440.3 341 76.5
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-116 422.2 357 70.0
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-105 386.3 341 69.8
A03p58160 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-97 360.1 206 98.1
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 8.2e-91 338.2 307 73.6
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 8.5e-80 301.6 344 60.2
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-79 299.7 395 57.2
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 2.7e-70 270.0 241 70.1
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-68 262.7 246 72.8
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 6.1e-54 215.7 213 70.9
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 1.2e-44 184.9 379 49.6
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 3.4e-44 183.3 218 56.0
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 9.8e-44 181.8 381 50.1
A07p17750 Brassica napus HOM05D004128 ORTHO05D017536 3.2e-42 176.8 102 100.0
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 1.6e-38 164.5 387 39.5
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 3.4e-36 156.8 134 72.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.7e-35 154.5 371 43.9
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.1e-34 151.8 89 95.5
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 3.0e-32 143.7 195 56.4
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 6.6e-32 142.5 337 39.8
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-31 139.8 217 58.1
C04p26210 Brassica napus HOM05D004128 ORTHO05D017536 2.8e-30 137.1 104 75.0
BolC4t24185H Brassica oleracea HOM05D004128 ORTHO05D017536 2.8e-30 137.1 104 75.0
BolC2t08771H Brassica oleracea HOM05D004128 ORTHO05D017536 1.8e-29 134.4 104 74.0
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-29 134.0 237 42.6
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-27 128.3 90 84.4
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 4.9e-27 126.3 137 56.9
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 4.9e-27 126.3 137 56.9
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 1.1e-26 125.2 246 44.3
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 2.1e-25 120.9 194 47.9
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.9e-23 114.4 461 35.6
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 5.6e-23 112.8 210 42.4
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.6e-22 111.3 262 39.7
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-21 108.2 155 51.6
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 6.4e-19 99.4 382 35.1
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 1.6e-17 94.7 134 55.2
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 8.7e-16 89.0 269 43.9
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 4.3e-15 86.7 46 100.0
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 4.3e-15 86.7 46 100.0
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 4.3e-15 86.7 46 100.0
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-14 85.1 46 97.8
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-14 85.1 47 95.7
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-14 85.1 47 95.7
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 2.1e-14 84.3 46 97.8
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 6.2e-14 82.8 47 91.5
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-13 81.3 90 57.8
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-12 78.6 90 56.7
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-12 78.2 81 58.0
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.5e-12 78.2 257 33.1
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-12 77.0 76 61.8
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 4.5e-12 76.6 228 35.5
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-12 76.3 111 48.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-11 74.7 87 56.3
BcaC01g02783 Brassica carinata HOM05D004128 ORTHO05D008395 3.8e-11 73.6 51 70.6
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 7.1e-10 69.3 290 36.9
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 7.9e-09 65.9 336 32.4
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 1.8e-08 64.7 79 55.7
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 1.8e-08 64.7 79 55.7
BcaC02g09038 Brassica carinata HOM05D004128 ORTHO05D008395 3.0e-08 63.9 41 75.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 3.0e-08 63.9 176 38.6
A07p17780 Brassica napus HOM05D004128 ORTHO05D020127 3.9e-08 63.5 32 100.0
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-08 62.4 58 70.7
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 8.7e-08 62.4 58 70.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 8.7e-08 62.4 119 42.0
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-07 62.0 346 27.5
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.5e-07 60.8 119 41.2
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 3.3e-07 60.5 379 31.4
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 3.3e-07 60.5 67 58.2
BcaB01g01062 Brassica carinata HOM05D008062 ORTHO05D011558 4.3e-07 60.1 195 31.8
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 4.3e-07 60.1 78 52.6
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 5.6e-07 59.7 201 34.8
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 5.6e-07 59.7 54 70.4
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-06 58.5 119 40.3
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-06 58.5 73 61.6
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.3e-06 58.5 119 40.3
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.6e-06 58.2 119 40.3
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.6e-06 58.2 119 40.3
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 2.1e-06 57.8 154 33.8
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-06 57.8 60 60.0
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 57.8 88 55.7
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 2.1e-06 57.8 119 40.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 2.1e-06 57.8 88 59.1
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 2.1e-06 57.8 117 46.2
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-06 57.8 136 37.5
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 2.8e-06 57.4 58 63.8
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 2.8e-06 57.4 88 55.7
BraA02t06440Z Brassica rapa HOM05D008062 ORTHO05D011707 2.8e-06 57.4 178 32.6
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 3.7e-06 57.0 174 38.5
BolC8t47741H Brassica oleracea HOM05D039310 ORTHO05D032948 3.7e-06 57.0 137 32.1
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 4.8e-06 56.6 73 50.7
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 4.8e-06 56.6 72 61.1
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 4.8e-06 56.6 194 35.1
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 6.2e-06 56.2 87 54.0
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 6.2e-06 56.2 87 54.0
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 6.2e-06 56.2 52 61.5
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 8.1e-06 55.8 54 68.5
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 8.1e-06 55.8 58 60.3


User provided reference genes

Program Settings