Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p09060 Brassica napus HOM05D013487 ORTHO05D015348 6.3e-107 391.0 222 100.0
BraA08t32908Z Brassica rapa HOM05D013487 ORTHO05D015348 1.3e-101 373.2 222 96.8
BolC8t47942H Brassica oleracea HOM05D013487 ORTHO05D015348 9.7e-100 367.1 224 95.5
BcaC07g37591 Brassica carinata HOM05D013487 ORTHO05D015348 2.2e-99 365.9 224 95.1
BcaB04g17956 Brassica carinata HOM05D013487 ORTHO05D015348 1.8e-85 319.7 222 75.2
Sp1g28320 Schrenkiella parvula HOM05D013487 ORTHO05D015348 1.0e-64 250.8 229 62.4
Thhalv10009422m.g Eutrema salsugineum HOM05D013487 ORTHO05D015348 2.7e-62 242.7 229 59.4
AL1G46850 Arabidopsis lyrata HOM05D013487 ORTHO05D015348 6.6e-48 194.9 231 51.9
AT1G32585 Arabidopsis thaliana HOM05D013487 ORTHO05D015348 5.0e-40 168.7 227 47.6
CARHR032050 Cardamine hirsuta HOM05D013487 ORTHO05D015348 2.9e-27 126.3 192 43.2
Carub.0001s3099 Capsella rubella HOM05D013487 ORTHO05D015348 7.6e-20 101.7 208 42.8
CARHR032040 Cardamine hirsuta HOM05D013487 ORTHO05D015348 3.9e-16 89.4 146 42.5
BcaC02g07727 Brassica carinata HOM05D002068 ORTHO05D002029 1.0e-08 64.7 313 30.4
BolC4t27901H Brassica oleracea HOM05D002068 ORTHO05D002029 2.3e-08 63.5 311 26.7
BcaB06g28833 Brassica carinata HOM05D002068 ORTHO05D002029 6.7e-08 62.0 85 43.5
C04p64180 Brassica napus HOM05D002068 ORTHO05D002029 8.7e-08 61.6 312 31.1
Carub.0004s1693 Capsella rubella HOM05D002068 ORTHO05D002029 1.9e-07 60.5 92 43.5
Thhalv10016759m.g Eutrema salsugineum HOM05D002068 ORTHO05D002029 1.9e-07 60.5 84 44.0
BcaC02g11626 Brassica carinata HOM05D002068 ORTHO05D002029 4.3e-07 59.3 82 45.1
A04p26780 Brassica napus HOM05D002068 ORTHO05D002029 4.3e-07 59.3 94 41.5
C04p12950 Brassica napus HOM05D002068 ORTHO05D002029 4.3e-07 59.3 82 45.1
BolC4t22938H Brassica oleracea HOM05D002068 ORTHO05D002029 4.3e-07 59.3 82 45.1
BraA04t18182Z Brassica rapa HOM05D002068 ORTHO05D002029 4.3e-07 59.3 94 41.5
AL1G46870 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 7.4e-07 58.5 282 27.7
Sp4g17450 Schrenkiella parvula HOM05D002068 ORTHO05D002029 7.4e-07 58.5 92 43.5
Atru.chr6.1710 Acer truncatum HOM05D002068 ORTHO05D002029 9.6e-07 58.2 94 45.7
AL4G31260 Arabidopsis lyrata HOM05D002068 ORTHO05D002029 1.3e-06 57.8 92 43.5
Ciclev10012154m.g Citrus clementina HOM05D002068 ORTHO05D002029 1.6e-06 57.4 94 44.7
BcaB02g09468 Brassica carinata HOM05D002068 ORTHO05D002029 2.1e-06 57.0 87 46.0
C03p22700 Brassica napus HOM05D002068 ORTHO05D002029 2.8e-06 56.6 94 42.6
A03p19480 Brassica napus HOM05D002068 ORTHO05D002029 3.6e-06 56.2 93 41.9
Actinidia03376 Actinidia chinensis HOM05D002068 ORTHO05D002029 4.8e-06 55.8 284 26.4
A05p10530 Brassica napus HOM05D002068 ORTHO05D002029 6.2e-06 55.5 82 43.9
BraA05t19991Z Brassica rapa HOM05D002068 ORTHO05D002029 6.2e-06 55.5 82 43.9
Manes.05G009900 Manihot esculenta HOM05D002068 ORTHO05D002029 6.2e-06 55.5 94 44.7
THA.LOC104814442 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 6.2e-06 55.5 94 44.7
BraA03t11201Z Brassica rapa HOM05D002068 ORTHO05D002029 8.1e-06 55.1 93 40.9
CSS0014279 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 8.1e-06 55.1 96 44.8
TWI60G1070 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 8.1e-06 55.1 92 44.6


User provided reference genes

Program Settings