Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 2.8e-208 728.4 371 100.0
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 8.0e-208 726.9 370 99.7
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 7.0e-204 713.8 371 97.3
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 1.2e-195 686.4 372 93.3
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 4.3e-185 651.4 371 88.1
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 4.0e-183 644.8 417 81.8
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 1.3e-173 613.2 373 84.7
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 3.8e-173 611.7 373 84.5
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.4e-172 609.0 373 84.2
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.4e-172 609.0 373 84.2
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 4.2e-172 608.2 372 82.5
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 9.3e-172 607.1 373 83.1
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.7e-170 602.8 368 81.5
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 5.1e-170 601.3 373 81.5
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 1.8e-167 592.8 373 82.3
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 7.6e-166 587.4 375 80.3
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 1.5e-153 546.6 374 72.5
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 4.3e-153 545.0 322 86.3
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 7.2e-148 527.7 376 68.1
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.9e-139 497.7 368 68.2
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 1.1e-137 493.8 340 71.5
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.7e-137 491.5 341 70.4
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.2e-136 489.6 337 71.5
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 6.3e-136 488.0 378 65.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 6.3e-136 488.0 344 70.1
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.4e-135 486.1 368 66.8
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 3.1e-135 485.7 365 67.4
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 5.3e-135 485.0 350 67.7
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 5.3e-135 485.0 358 67.6
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 6.9e-135 484.6 335 70.4
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 3.4e-134 482.3 343 70.3
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 5.9e-134 481.5 325 72.6
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 1.0e-133 480.7 340 70.3
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 1.3e-133 480.3 376 63.3
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.3e-133 480.3 378 64.0
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-133 480.3 379 65.7
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 2.9e-133 479.2 331 70.1
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 2.9e-133 479.2 362 67.1
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 2.9e-133 479.2 329 71.1
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 5.0e-133 478.4 322 71.7
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 5.0e-133 478.4 364 66.8
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 1.1e-132 477.2 345 67.8
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.1e-132 477.2 374 65.8
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 1.4e-132 476.9 321 71.7
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.2e-132 475.7 365 66.3
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 4.2e-132 475.3 325 70.8
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 4.2e-132 475.3 379 64.1
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 5.5e-132 474.9 329 71.1
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 7.2e-132 474.6 336 69.0
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 7.2e-132 474.6 333 70.9
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 1.2e-131 473.8 373 64.9
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.2e-131 473.8 337 69.4
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 1.2e-131 473.8 331 70.1
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.7e-131 471.9 392 63.5
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 6.1e-131 471.5 325 70.2
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 7.9e-131 471.1 326 69.6
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.0e-130 470.7 333 67.9
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 1.0e-130 470.7 345 67.2
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.4e-130 470.3 339 69.0
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 2.3e-130 469.5 332 69.3
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.0e-130 469.2 334 68.3
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 3.0e-130 469.2 333 68.5
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 6.7e-130 468.0 323 70.3
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 6.7e-130 468.0 340 67.1
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.8e-130 467.6 331 69.2
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.8e-130 467.6 331 69.2
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 8.8e-130 467.6 340 67.1
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 2.6e-129 466.1 357 66.9
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 5.7e-129 464.9 334 67.4
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 3.7e-128 462.2 359 65.2
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.1e-127 460.7 375 64.0
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 1.8e-127 459.9 339 65.8
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 1.0e-125 454.1 347 65.1
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 6.5e-125 451.4 323 67.5
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 3.2e-124 449.1 355 63.9
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 7.2e-124 448.0 277 76.9
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 3.6e-123 445.7 341 65.1
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 4.7e-123 445.3 363 61.7
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 8.0e-123 444.5 360 62.5
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.8e-122 443.4 345 62.0
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.8e-122 443.4 345 62.0
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 6.7e-122 441.4 278 74.5
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.1e-121 440.7 373 60.6
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 5.7e-121 438.3 351 63.5
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 2.8e-120 436.0 333 65.5
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.8e-120 435.3 381 57.2
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 6.3e-120 434.9 334 65.3
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 2.4e-119 433.0 359 61.6
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 1.7e-117 426.8 519 48.4
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 8.5e-117 424.5 451 51.0
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 7.2e-116 421.4 344 62.2
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 9.4e-116 421.0 418 56.5
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 8.0e-115 417.9 376 58.2
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 8.0e-115 417.9 327 63.9
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 1.4e-114 417.2 346 58.7
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 4.4e-113 412.1 332 63.3
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.7e-112 410.2 325 63.4
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 8.3e-112 407.9 373 56.6
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 1.1e-111 407.5 329 60.8
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 7.7e-110 401.4 346 57.8
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 1.9e-108 396.7 328 62.2
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 7.5e-105 384.8 299 63.5
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 7.5e-105 384.8 379 54.6
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 4.9e-104 382.1 271 67.5
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 2.9e-101 372.9 265 69.4
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 4.3e-100 369.0 307 62.5
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 3.6e-99 365.9 258 68.6
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 7.0e-95 351.7 219 75.8
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 9.2e-95 351.3 333 57.7
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 5.9e-94 348.6 216 75.9
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 8.6e-93 344.7 216 73.6
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 1.2e-89 334.3 309 57.6
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 1.2e-86 324.3 262 65.6
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 1.2e-83 314.3 218 72.0
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.8e-82 310.5 219 69.9
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.2e-81 307.8 546 37.2
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 1.4e-79 300.8 202 69.8
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.6e-78 297.4 216 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.5e-78 296.2 268 55.2
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.5e-76 290.8 215 65.6
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 6.8e-74 282.0 242 59.9
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.7e-69 267.3 328 48.5
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 2.9e-64 250.0 186 66.1
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.7e-43 179.9 254 40.9
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.5e-38 163.3 262 36.3
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 3.9e-29 133.3 286 35.0
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 9.7e-28 128.6 123 55.3
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 9.1e-26 122.1 88 72.7
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 4.5e-25 119.8 130 48.5
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 2.2e-24 117.5 252 32.5
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 6.5e-24 115.9 97 62.9
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.9e-23 114.4 131 54.2
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.1e-22 110.9 64 81.2
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-21 108.6 64 81.2
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.0e-21 108.6 64 81.2
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.4e-21 108.2 102 53.9
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.8e-21 107.8 102 55.9
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.7e-21 105.9 64 76.6
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.7e-21 105.9 64 76.6
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.7e-21 105.9 64 76.6
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-19 101.7 64 73.4
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 7.9e-14 82.4 54 74.1
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 2.3e-13 80.9 170 36.5
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 1.1e-12 78.6 73 54.8
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 1.5e-12 78.2 236 28.8
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 2.6e-12 77.4 166 31.3
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 7.7e-09 65.9 170 31.2
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 7.7e-09 65.9 161 29.8
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 2.5e-07 60.8 195 29.2


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