Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p08530 Brassica napus HOM05D010196 ORTHO05D011201 1.4e-43 179.1 84 100.0
BraA08t32864Z Brassica rapa HOM05D010196 ORTHO05D011201 2.9e-41 171.4 84 96.4
BraA08t32867Z Brassica rapa HOM05D010196 ORTHO05D011201 3.8e-41 171.0 84 96.4
A08p08540 Brassica napus HOM05D010196 ORTHO05D011201 6.6e-41 170.2 84 95.2
BraA08t32866Z Brassica rapa HOM05D010196 ORTHO05D011201 1.5e-40 169.1 84 95.2
A08p08480 Brassica napus HOM05D010196 ORTHO05D011201 1.9e-40 168.7 84 94.0
A08p08490 Brassica napus HOM05D010196 ORTHO05D011201 1.9e-40 168.7 84 94.0
A08p08500 Brassica napus HOM05D010196 ORTHO05D011201 1.9e-40 168.7 84 94.0
BraA08t32868Z Brassica rapa HOM05D010196 ORTHO05D011201 4.3e-40 167.5 84 95.2
BraA08t32869Z Brassica rapa HOM05D010196 ORTHO05D011201 2.1e-39 165.2 84 91.7
A08p08510 Brassica napus HOM05D010196 ORTHO05D011201 8.0e-39 163.3 84 91.7
BraA08t32863Z Brassica rapa HOM05D010196 ORTHO05D011201 3.0e-38 161.4 84 91.7
BcaC07g37554 Brassica carinata HOM05D010196 ORTHO05D011201 1.9e-32 142.1 78 88.5
Sp3g03070 Schrenkiella parvula HOM05D000203 ORTHO05D011201 2.3e-17 92.0 74 66.2
Thhalv10022229m.g Eutrema salsugineum HOM05D000203 ORTHO05D011201 3.6e-15 84.7 78 59.0
A08p08520 Brassica napus HOM05D010196 ORTHO05D017684 2.4e-14 82.0 41 95.1
BcaNung06074 Brassica carinata HOM05D000203 ORTHO05D011201 1.4e-11 72.8 76 53.9
BraA01t04533Z Brassica rapa HOM05D000203 ORTHO05D011201 2.4e-11 72.0 73 58.9
A08p08470 Brassica napus HOM05D010196 ORTHO05D017684 5.4e-11 70.9 42 85.7
BraA08t32865Z Brassica rapa HOM05D010196 ORTHO05D017684 7.1e-11 70.5 35 94.3
BcaNung06071 Brassica carinata HOM05D000203 ORTHO05D011201 6.0e-10 67.4 59 59.3
BcaNung06072 Brassica carinata HOM05D000203 ORTHO05D011201 6.0e-10 67.4 59 59.3
A08p08550 Brassica napus HOM05D010196 ORTHO05D017684 1.0e-09 66.6 35 88.6
BolC1t05764H Brassica oleracea HOM05D000203 ORTHO05D011201 1.3e-09 66.2 59 57.6
AT3G04100 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 3.0e-09 65.1 72 54.2
BcaC04g23345 Brassica carinata HOM05D000203 ORTHO05D011201 3.0e-09 65.1 78 51.3
C09p09620 Brassica napus HOM05D000203 ORTHO05D011201 3.9e-09 64.7 78 51.3
BolC9t53873H Brassica oleracea HOM05D000203 ORTHO05D011201 3.9e-09 64.7 78 51.3
BolC8t47895H Brassica oleracea HOM05D010196 ORTHO05D017684 5.1e-09 64.3 35 85.7
CARHR121590 Cardamine hirsuta HOM05D000203 ORTHO05D011201 1.1e-08 63.2 74 48.6
A08p08460 Brassica napus HOM05D010196 ORTHO05D017684 1.5e-08 62.8 35 85.7
BraA08t32862Z Brassica rapa HOM05D010196 ORTHO05D017684 1.5e-08 62.8 35 85.7
BraA08t32870Z Brassica rapa HOM05D010196 ORTHO05D017684 1.9e-08 62.4 35 85.7
A01p40990 Brassica napus HOM05D000203 ORTHO05D011201 5.6e-08 60.8 59 57.6
BNapus_Darmor_BZH_scaffold_78p00720 Brassica napus HOM05D000203 ORTHO05D011201 5.6e-08 60.8 59 57.6
A09p08480 Brassica napus HOM05D010196 ORTHO05D011201 7.3e-08 60.5 78 48.7
BraA09t36498Z Brassica rapa HOM05D000203 ORTHO05D011201 7.3e-08 60.5 78 48.7
BcaC09g48630 Brassica carinata HOM05D000203 ORTHO05D011201 1.4e-06 56.2 58 50.0
Carub.0003s0334 Capsella rubella HOM05D000203 ORTHO05D000135 9.0e-06 53.5 72 44.4


User provided reference genes

Program Settings