Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p08480 Brassica napus HOM05D010196 ORTHO05D011201 1.4e-43 179.1 84 100.0
A08p08490 Brassica napus HOM05D010196 ORTHO05D011201 1.4e-43 179.1 84 100.0
A08p08500 Brassica napus HOM05D010196 ORTHO05D011201 1.4e-43 179.1 84 100.0
A08p08510 Brassica napus HOM05D010196 ORTHO05D011201 5.9e-42 173.7 84 97.6
BraA08t32864Z Brassica rapa HOM05D010196 ORTHO05D011201 1.1e-40 169.5 84 95.2
A08p08530 Brassica napus HOM05D010196 ORTHO05D011201 1.5e-40 169.1 84 94.0
BraA08t32867Z Brassica rapa HOM05D010196 ORTHO05D011201 1.5e-40 169.1 84 95.2
A08p08540 Brassica napus HOM05D010196 ORTHO05D011201 2.5e-40 168.3 84 94.0
BraA08t32869Z Brassica rapa HOM05D010196 ORTHO05D011201 3.3e-40 167.9 84 92.9
BraA08t32866Z Brassica rapa HOM05D010196 ORTHO05D011201 5.6e-40 167.2 84 94.0
BraA08t32868Z Brassica rapa HOM05D010196 ORTHO05D011201 1.6e-39 165.6 84 94.0
BraA08t32863Z Brassica rapa HOM05D010196 ORTHO05D011201 4.7e-39 164.1 84 92.9
BcaC07g37554 Brassica carinata HOM05D010196 ORTHO05D011201 3.0e-33 144.8 78 89.7
Sp3g03070 Schrenkiella parvula HOM05D000203 ORTHO05D011201 1.1e-16 89.7 74 64.9
A08p08520 Brassica napus HOM05D010196 ORTHO05D017684 8.1e-15 83.6 41 97.6
Thhalv10022229m.g Eutrema salsugineum HOM05D000203 ORTHO05D011201 1.4e-14 82.8 78 57.7
A08p08470 Brassica napus HOM05D010196 ORTHO05D017684 1.4e-11 72.8 42 88.1
A08p08550 Brassica napus HOM05D010196 ORTHO05D017684 2.7e-10 68.6 35 91.4
BraA08t32865Z Brassica rapa HOM05D010196 ORTHO05D017684 4.6e-10 67.8 35 91.4
BcaNung06074 Brassica carinata HOM05D000203 ORTHO05D011201 6.0e-10 67.4 76 50.0
BraA01t04533Z Brassica rapa HOM05D000203 ORTHO05D011201 7.8e-10 67.0 73 56.2
BcaC04g23345 Brassica carinata HOM05D000203 ORTHO05D011201 1.3e-09 66.2 78 51.3
BolC8t47895H Brassica oleracea HOM05D010196 ORTHO05D017684 1.3e-09 66.2 35 88.6
BcaNung06071 Brassica carinata HOM05D000203 ORTHO05D011201 1.7e-09 65.9 57 59.6
BcaNung06072 Brassica carinata HOM05D000203 ORTHO05D011201 1.7e-09 65.9 57 59.6
C09p09620 Brassica napus HOM05D000203 ORTHO05D011201 1.7e-09 65.9 78 51.3
BolC9t53873H Brassica oleracea HOM05D000203 ORTHO05D011201 1.7e-09 65.9 78 51.3
A08p08460 Brassica napus HOM05D010196 ORTHO05D017684 3.9e-09 64.7 35 88.6
BolC1t05764H Brassica oleracea HOM05D000203 ORTHO05D011201 3.9e-09 64.7 57 57.9
BraA08t32862Z Brassica rapa HOM05D010196 ORTHO05D017684 3.9e-09 64.7 35 88.6
BraA08t32870Z Brassica rapa HOM05D010196 ORTHO05D017684 5.1e-09 64.3 35 88.6
AT3G04100 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 1.5e-08 62.8 72 52.8
A09p08480 Brassica napus HOM05D010196 ORTHO05D011201 3.3e-08 61.6 78 48.7
BraA09t36498Z Brassica rapa HOM05D000203 ORTHO05D011201 3.3e-08 61.6 78 48.7
CARHR121590 Cardamine hirsuta HOM05D000203 ORTHO05D011201 9.6e-08 60.1 74 45.9
A01p40990 Brassica napus HOM05D000203 ORTHO05D011201 1.1e-06 56.6 57 56.1
BNapus_Darmor_BZH_scaffold_78p00720 Brassica napus HOM05D000203 ORTHO05D011201 1.1e-06 56.6 57 56.1


User provided reference genes

Program Settings