Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p07880 Brassica napus HOM05D008465 ORTHO05D010905 2.2e-279 964.9 473 100.0
BNapus_Darmor_BZH_scaffold_258p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.6e-229 799.3 473 83.5
A08p07810 Brassica napus HOM05D008465 ORTHO05D010905 1.7e-226 789.3 473 82.5
A10p08450 Brassica napus HOM05D008465 ORTHO05D010905 8.6e-223 776.9 473 81.8
BNapus_Darmor_BZH_scaffold_51p00140 Brassica napus HOM05D008465 ORTHO05D010905 1.2e-211 740.0 427 84.5
BNapus_Darmor_BZH_scaffold_51p00010 Brassica napus HOM05D008465 ORTHO05D010905 4.3e-198 694.9 358 92.7
BraA01t02771Z Brassica rapa HOM05D008465 ORTHO05D010905 3.2e-193 678.7 398 83.9
BNapus_Darmor_BZH_scaffold_94p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.6e-168 596.7 384 77.9
BolC6t36352H Brassica oleracea HOM05D008465 ORTHO05D010905 4.7e-168 595.1 472 65.0
BNapus_Darmor_BZH_scaffold_51p00120 Brassica napus HOM05D008465 ORTHO05D010905 5.7e-166 588.2 315 89.8
BNapus_Darmor_BZH_scaffold_45p00060 Brassica napus HOM05D008465 ORTHO05D010905 3.6e-152 542.3 314 84.4
BNapus_Darmor_BZH_scaffold_143p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.9e-145 520.0 315 82.5
BNapus_Darmor_BZH_scaffold_143p00020 Brassica napus HOM05D008465 ORTHO05D010905 2.8e-136 489.6 404 61.6
BNapus_Darmor_BZH_scaffold_45p00040 Brassica napus HOM05D008465 ORTHO05D010905 2.3e-135 486.5 404 61.1
BNapus_Darmor_BZH_scaffold_51p00080 Brassica napus HOM05D008465 ORTHO05D010905 2.2e-133 479.9 314 76.8
C03p65320 Brassica napus HOM05D008465 ORTHO05D010905 2.8e-133 479.6 314 76.8
BNapus_Darmor_BZH_scaffold_51p00100 Brassica napus HOM05D008465 ORTHO05D010905 1.2e-120 437.6 220 98.2
A03p67080 Brassica napus HOM05D008465 ORTHO05D010905 5.4e-108 395.6 207 94.7
BraA08t33370Z Brassica rapa HOM05D008465 ORTHO05D010905 1.5e-94 350.9 431 49.4
BolC1t02569H Brassica oleracea HOM05D008465 ORTHO05D033806 7.1e-92 342.0 279 63.4
BolC8t47644H Brassica oleracea HOM05D008465 ORTHO05D033806 1.5e-89 334.3 268 63.8
BcaC05g27686 Brassica carinata HOM05D008465 ORTHO05D010905 1.2e-78 298.1 277 58.8
BcaC01g02201 Brassica carinata HOM05D008465 ORTHO05D010905 2.6e-78 297.0 197 77.2
BolC1t02570H Brassica oleracea HOM05D008465 ORTHO05D033806 1.3e-77 294.7 215 67.0
BNapus_Darmor_BZH_scaffold_197p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.1e-73 281.6 153 85.0
BolC3t18787H Brassica oleracea HOM05D008465 ORTHO05D010905 2.6e-70 270.4 211 68.7
BcaB03g16205 Brassica carinata HOM05D008465 ORTHO05D010905 1.5e-65 254.6 161 72.0
A06p22940 Brassica napus HOM05D008465 ORTHO05D010905 6.3e-64 249.2 203 64.5
BraA08t33368Z Brassica rapa HOM05D008465 ORTHO05D010905 1.8e-63 247.7 130 88.5
C02p42720 Brassica napus HOM05D008465 ORTHO05D010905 2.6e-62 243.8 138 80.4
BNapus_Darmor_BZH_scaffold_45p00050 Brassica napus HOM05D008465 ORTHO05D010905 8.5e-61 238.8 138 79.7
A07p05690 Brassica napus HOM05D008465 ORTHO05D042024 1.0e-58 231.9 196 58.2
BraA07t28363Z Brassica rapa HOM05D008465 ORTHO05D042024 1.0e-58 231.9 196 58.2
BNapus_Darmor_BZH_scaffold_51p00050 Brassica napus HOM05D008465 ORTHO05D010905 2.0e-49 201.1 110 88.2
BolC7t41352H Brassica oleracea HOM05D008465 ORTHO05D010905 2.8e-40 170.6 110 78.2
BolC8t47743H Brassica oleracea HOM05D008465 ORTHO05D010905 2.8e-40 170.6 110 78.2
BcaB05g22720 Brassica carinata HOM05D008465 ORTHO05D010905 5.0e-37 159.8 110 74.5
BcaNung01941 Brassica carinata HOM05D008465 ORTHO05D010905 2.0e-33 147.9 133 62.4
BcaC08g43830 Brassica carinata HOM05D008465 ORTHO05D010905 1.3e-29 135.2 183 44.8
C09p38420 Brassica napus HOM05D008465 ORTHO05D021937 4.2e-28 130.2 64 89.1
BNapus_Darmor_BZH_scaffold_69p00050 Brassica napus HOM05D008465 ORTHO05D021937 1.4e-26 125.2 55 100.0
C06p23460 Brassica napus HOM05D008465 ORTHO05D010905 7.2e-20 102.8 57 80.7
C06p21000 Brassica napus HOM05D008465 ORTHO05D021937 1.8e-18 98.2 47 91.5
BcaB03g16191 Brassica carinata HOM05D008465 ORTHO05D092063 4.9e-16 90.1 72 61.1
BolC9t56697H Brassica oleracea HOM05D008795 ORTHO05D027698 8.6e-13 79.3 186 34.9
BraA09t38626Z Brassica rapa HOM05D009262 ORTHO05D011562 2.6e-09 67.8 140 32.1
BNapus_Darmor_BZH_scaffold_69p00060 Brassica napus HOM05D008465 ORTHO05D010905 4.9e-08 63.5 29 96.6
BraA01t02922Z Brassica rapa HOM05D013010 ORTHO05D018622 1.9e-07 61.6 133 36.1
BcaB02g11328 Brassica carinata HOM05D012556 ORTHO05D000563 9.2e-07 59.3 117 36.8
BcaC05g27951 Brassica carinata HOM05D008465 ORTHO05D021937 4.6e-06 57.0 75 45.3


User provided reference genes

Program Settings