Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 2.9e-106 388.7 205 100.0
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.7e-103 379.4 206 98.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 6.9e-92 340.9 183 100.0
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 3.8e-90 335.1 184 98.9
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 4.9e-90 334.7 184 98.9
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.7e-88 328.9 184 97.3
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 5.6e-86 321.2 183 93.4
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 3.4e-83 312.0 183 87.4
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.3e-82 310.1 183 88.0
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 2.2e-82 309.3 183 86.3
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.9e-82 308.9 183 85.2
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 9.3e-81 303.9 183 86.3
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.2e-73 278.5 184 81.5
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.8e-69 265.0 171 76.0
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 3.7e-61 238.8 171 69.0
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 8.2e-61 237.7 172 68.0
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.1e-60 237.3 175 65.7
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.4e-60 236.9 168 68.5
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.1e-60 235.7 160 70.6
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 9.0e-60 234.2 179 67.0
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.5e-59 233.4 172 66.3
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.6e-59 232.6 164 68.9
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.2e-58 229.6 172 65.1
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.2e-58 229.6 168 66.1
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 2.2e-58 229.6 168 66.1
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 2.9e-58 229.2 170 63.5
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.8e-58 228.8 169 66.9
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.0e-58 228.4 172 65.1
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 5.0e-58 228.4 172 65.1
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 5.0e-58 228.4 197 60.4
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 6.5e-58 228.0 172 65.1
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 8.5e-58 227.6 169 66.3
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.1e-57 227.3 174 63.2
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 2.5e-57 226.1 169 65.1
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 3.2e-57 225.7 165 65.5
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 4.2e-57 225.3 167 64.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.5e-57 224.9 172 64.0
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 5.5e-57 224.9 162 66.0
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 5.5e-57 224.9 169 65.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 7.2e-57 224.6 201 55.2
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.2e-56 223.8 168 64.9
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.6e-56 223.4 169 65.7
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 2.1e-56 223.0 160 68.1
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 2.1e-56 223.0 166 64.5
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.1e-56 223.0 163 65.6
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.1e-56 223.0 173 63.6
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 2.7e-56 222.6 167 64.1
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 3.6e-56 222.2 172 64.5
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 3.6e-56 222.2 171 63.2
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 7.9e-56 221.1 179 61.5
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 7.9e-56 221.1 172 64.5
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.0e-55 220.7 165 66.1
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.0e-55 220.7 169 65.1
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.3e-55 220.3 167 60.5
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.3e-55 220.3 166 63.9
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.8e-55 219.9 163 64.4
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.8e-55 219.9 171 61.4
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.8e-55 219.9 171 61.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 5.1e-55 218.4 164 65.9
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 6.7e-55 218.0 171 64.3
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 8.7e-55 217.6 171 63.7
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.7e-55 217.6 171 59.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 7.4e-54 214.5 186 58.1
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 7.4e-54 214.5 168 60.7
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 9.7e-54 214.2 162 63.6
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 9.7e-54 214.2 172 64.0
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.3e-53 213.8 174 59.8
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.6e-53 213.4 165 66.1
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.6e-53 213.4 148 69.6
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 2.2e-53 213.0 161 64.0
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.8e-53 212.6 162 63.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.8e-53 212.6 182 60.4
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 3.7e-53 212.2 165 61.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.4e-52 210.3 162 64.2
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 1.4e-52 210.3 175 60.6
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.4e-52 209.5 186 57.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 4.1e-52 208.8 149 69.8
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.6e-51 206.1 160 63.8
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 7.7e-51 204.5 171 60.2
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 8.5e-50 201.1 178 57.3
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.4e-49 200.3 169 61.5
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 9.4e-49 197.6 232 46.1
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 3.6e-48 195.7 146 63.0
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.4e-47 193.7 172 57.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.9e-47 192.2 151 60.3
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.3e-46 189.1 130 66.9
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 5.7e-46 188.3 172 55.2
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.3e-45 187.2 151 62.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 6.9e-44 181.4 129 66.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.6e-43 179.5 119 72.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 3.8e-42 175.6 118 71.2
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 5.5e-41 171.8 119 68.9
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.3e-38 162.5 177 51.4
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 7.4e-38 161.4 166 51.2
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.3e-34 150.6 176 49.4
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 2.2e-34 149.8 127 57.5
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 4.2e-33 145.6 162 49.4
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 9.4e-33 144.4 185 42.7
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.0e-31 139.0 147 47.6
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 7.2e-25 118.2 172 39.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.2e-24 117.5 83 65.1
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 8.0e-24 114.8 84 69.0
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 9.8e-22 107.8 128 46.1
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-21 107.1 178 42.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.4e-20 103.2 157 34.4
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 4.1e-20 102.4 74 63.5
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.3e-18 97.4 69 65.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 4.7e-16 89.0 137 38.0
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.0e-15 87.8 59 67.8
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 2.8e-13 79.7 69 56.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 4.4e-06 55.8 39 66.7
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 4.4e-06 55.8 40 62.5


User provided reference genes

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