Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 3.5e-26 121.7 111 100.0
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 3.5e-26 121.7 111 100.0
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 3.5e-26 121.7 111 100.0
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 2.5e-24 115.5 111 99.1
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-22 110.2 111 95.5
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-22 110.2 111 86.5
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 1.1e-22 110.2 111 86.5
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 5.3e-22 107.8 111 93.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 3.4e-21 105.1 111 82.0
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-21 104.0 111 82.0
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-21 104.0 111 85.6
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-21 104.0 111 85.6
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 7.6e-21 104.0 111 85.6
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 2.9e-20 102.1 111 92.8
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 1.2e-18 96.7 111 90.1
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 2.7e-18 95.5 111 86.5
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 2.7e-18 95.5 111 89.2
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 4.3e-16 88.2 107 75.7
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 9.7e-16 87.0 111 85.6
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.3e-15 86.7 109 50.5
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 6.9e-14 80.9 95 81.1
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 2.6e-13 79.0 122 76.2
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.4e-13 78.6 111 45.0
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.0e-12 74.7 111 44.1
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.1e-11 73.6 109 43.1
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.5e-11 72.4 111 43.2
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 2.5e-11 72.4 109 42.2
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.2e-11 71.6 111 42.3
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.1e-10 69.3 108 40.7
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 2.1e-10 69.3 112 43.8
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 3.6e-10 68.6 108 70.4
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 3.6e-10 68.6 108 70.4
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 3.6e-10 68.6 108 70.4
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 3.6e-10 68.6 108 70.4
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 4.6e-10 68.2 109 40.4
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 1.8e-09 66.2 110 40.9
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 3.9e-09 65.1 111 39.6
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 5.1e-09 64.7 111 39.6
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 1.9e-08 62.8 112 39.3
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 5.7e-08 61.2 39 76.9
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 7.4e-08 60.8 45 75.6
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 7.4e-08 60.8 45 75.6
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.3e-07 60.1 108 37.0
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.2e-07 59.3 43 67.4
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 3.7e-07 58.5 107 36.4
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 8.2e-07 57.4 108 36.1
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.1e-06 57.0 108 36.1
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.4e-06 56.6 108 36.1
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.4e-06 56.6 108 36.1
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.8e-06 56.2 108 34.3
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.8e-06 56.2 108 36.1
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 2.4e-06 55.8 33 84.8
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 2.4e-06 55.8 33 84.8
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.4e-06 55.8 110 36.4
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.4e-06 55.8 106 35.8
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-06 55.5 107 44.9
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.1e-06 55.5 107 44.9
AL3G39590 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 5.3e-06 54.7 109 52.3
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 34.3
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 5.3e-06 54.7 108 53.7
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-06 54.3 108 48.1
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-06 54.3 108 48.1


User provided reference genes

Program Settings