Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 9.7e-127 456.8 233 100.0
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 9.7e-127 456.8 233 100.0
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 2.8e-126 455.3 233 99.6
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 2.8e-126 455.3 233 99.6
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 2.8e-126 455.3 233 99.6
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 3.6e-121 438.3 233 97.0
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.2e-119 433.3 233 93.6
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 1.1e-117 426.8 233 92.3
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 1.4e-112 409.8 233 88.0
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 4.0e-112 408.3 233 88.0
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 4.4e-111 404.8 231 87.9
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 3.2e-93 345.5 196 87.2
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 6.0e-92 341.3 233 74.2
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 5.0e-91 338.2 233 73.8
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.1e-90 337.0 233 73.4
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 1.5e-90 336.7 233 73.8
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 3.3e-90 335.5 233 74.7
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 2.8e-89 332.4 231 72.7
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 2.3e-88 329.3 231 72.3
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 2.3e-88 329.3 231 72.3
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 4.0e-88 328.6 231 72.3
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 4.0e-88 328.6 231 72.3
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 5.2e-88 328.2 233 70.4
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 9.8e-87 323.9 231 71.9
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 2.7e-84 315.8 233 70.4
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 1.0e-83 313.9 224 71.4
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 8.6e-83 310.8 224 70.5
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 1.9e-82 309.7 223 67.3
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 4.6e-76 288.5 217 65.0
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 1.0e-75 287.3 229 65.9
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 1.0e-75 287.3 229 65.9
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 3.9e-75 285.4 217 62.7
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 5.1e-75 285.0 218 62.4
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 8.6e-75 284.3 224 61.6
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 8.6e-75 284.3 220 61.8
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 8.6e-75 284.3 224 61.6
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.1e-74 283.9 230 60.9
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 1.1e-74 283.9 227 62.1
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 2.5e-74 282.7 223 59.2
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 4.3e-74 282.0 220 62.3
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 7.3e-74 281.2 220 62.7
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 7.3e-74 281.2 217 61.3
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 9.6e-74 280.8 226 60.2
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 1.2e-73 280.4 227 61.2
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 1.6e-73 280.0 222 59.5
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 1.6e-73 280.0 223 60.5
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 2.8e-73 279.3 230 59.6
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 4.7e-73 278.5 221 59.3
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 4.7e-73 278.5 228 58.8
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 6.2e-73 278.1 224 59.4
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.1e-72 277.3 222 60.8
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 1.4e-72 276.9 217 60.8
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 1.8e-72 276.6 222 60.8
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.8e-72 276.6 228 60.1
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 3.1e-72 275.8 226 61.5
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 3.1e-72 275.8 222 60.4
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 4.0e-72 275.4 226 59.3
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 5.2e-72 275.0 225 59.6
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 5.2e-72 275.0 225 60.9
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 5.2e-72 275.0 225 60.9
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.9e-72 274.6 228 59.6
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.9e-72 274.6 228 59.6
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 1.2e-71 273.9 217 62.2
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 1.2e-71 273.9 226 58.8
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 1.5e-71 273.5 231 58.9
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 2.6e-71 272.7 223 60.5
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 2.6e-71 272.7 224 60.3
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 3.4e-71 272.3 220 60.0
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 3.4e-71 272.3 228 59.2
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 4.4e-71 271.9 227 60.4
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 4.4e-71 271.9 217 60.4
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 5.8e-71 271.6 221 60.2
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 5.8e-71 271.6 224 58.0
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 5.8e-71 271.6 227 59.5
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 7.6e-71 271.2 217 60.4
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 1.3e-70 270.4 227 59.5
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 1.7e-70 270.0 226 59.7
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.7e-70 270.0 223 59.2
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 2.9e-70 269.2 218 60.6
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 2.9e-70 269.2 227 58.6
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 4.9e-70 268.5 214 60.3
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 8.4e-70 267.7 214 60.7
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 3.2e-69 265.8 217 59.0
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 4.2e-69 265.4 227 57.3
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 7.1e-69 264.6 216 59.7
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 9.3e-69 264.2 219 59.4
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 1.2e-68 263.8 215 60.5
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 1.2e-68 263.8 219 60.7
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 2.1e-68 263.1 223 58.3
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 3.5e-68 262.3 223 58.3
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 4.6e-68 261.9 224 54.5
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 4.6e-68 261.9 220 56.8
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 6.0e-68 261.5 223 57.8
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 6.0e-68 261.5 220 55.0
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 6.0e-68 261.5 223 59.6
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 2.3e-67 259.6 252 52.4
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 3.0e-67 259.2 228 53.5
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 5.1e-67 258.5 224 56.7
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 6.6e-67 258.1 226 56.6
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 8.7e-67 257.7 226 57.1
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 1.1e-66 257.3 232 56.9
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 1.1e-66 257.3 226 56.6
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 1.9e-66 256.5 195 62.6
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 1.9e-66 256.5 220 55.9
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 3.3e-66 255.8 217 57.6
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 7.3e-66 254.6 221 57.0
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 3.6e-65 252.3 224 54.0
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 4.0e-64 248.8 206 60.7
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 2.0e-63 246.5 251 52.2
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.6e-63 246.1 189 62.4
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 7.6e-63 244.6 218 59.6
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 2.2e-62 243.0 217 55.3
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 3.8e-62 242.3 225 55.6
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 4.9e-62 241.9 181 68.0
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 2.4e-61 239.6 194 56.7
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 4.2e-61 238.8 220 55.0
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 4.2e-61 238.8 281 49.1
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 5.4e-61 238.4 199 57.8
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.6e-60 236.9 212 57.1
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.6e-60 236.9 212 57.1
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 7.9e-60 234.6 245 50.2
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 7.9e-60 234.6 223 54.3
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 3.9e-59 232.3 185 59.5
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 3.9e-59 232.3 223 51.1
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 1.9e-58 229.9 220 52.7
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 2.4e-56 223.0 192 55.2
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 6.9e-56 221.5 205 52.2
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.7e-54 216.9 220 50.0
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 6.4e-54 214.9 196 54.6
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 3.3e-50 202.6 157 59.2
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 5.6e-50 201.8 158 60.1
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 8.2e-49 198.0 152 59.9
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 1.8e-48 196.8 208 49.0
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.3e-46 190.7 220 45.5
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 1.4e-45 187.2 150 58.0
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 5.5e-45 185.3 170 57.1
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 2.1e-44 183.3 218 45.9
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.0e-43 181.0 150 56.0
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 1.8e-43 180.3 221 44.3
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 3.0e-43 179.5 234 43.2
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 9.7e-42 174.5 216 43.1
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 4.5e-39 165.6 219 42.0
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 7.2e-37 158.3 228 43.0
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 6.7e-35 151.8 119 61.3
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 5.3e-32 142.1 117 56.4
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 6.9e-32 141.7 122 56.6
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 6.5e-30 135.2 194 38.7
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 1.1e-26 124.4 89 65.2
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 2.8e-25 119.8 92 60.9
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 4.8e-25 119.0 148 40.5
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.8e-24 117.1 124 48.4
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 3.1e-24 116.3 217 34.1
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.7e-17 94.0 73 65.8
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 1.7e-14 84.0 69 62.3
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.9e-14 83.2 153 34.0
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.9e-14 83.2 153 34.0
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 5.5e-13 79.0 62 62.9
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 2.7e-12 76.6 69 50.7
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 9.1e-08 61.6 77 48.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.7e-07 60.1 49 49.0


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