Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p06140 Brassica napus HOM05D000675 ORTHO05D018767 2.5e-35 151.4 66 100.0
BraA08t32614Z Brassica rapa HOM05D000675 ORTHO05D018767 2.5e-35 151.4 66 100.0
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 1.8e-30 135.2 66 90.9
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 1.8e-30 135.2 66 90.9
C07p58360 Brassica napus HOM05D000675 ORTHO05D018767 1.6e-29 132.1 66 89.4
BolC7t46290H Brassica oleracea HOM05D000675 ORTHO05D018767 1.6e-29 132.1 66 89.4
C07p04400 Brassica napus HOM05D000675 ORTHO05D018767 1.9e-27 125.2 66 81.8
BcaC05g25609 Brassica carinata HOM05D000675 ORTHO05D021717 5.2e-25 117.1 59 88.1
C06p13550 Brassica napus HOM05D000675 ORTHO05D032205 8.6e-20 99.8 60 71.7
BolC6t36519H Brassica oleracea HOM05D000675 ORTHO05D032205 8.6e-20 99.8 60 71.7
BraA02t08414Z Brassica rapa HOM05D000675 ORTHO05D018767 3.0e-17 91.3 55 63.6
C01p30130 Brassica napus HOM05D000675 ORTHO05D018767 1.3e-15 85.9 55 60.0
BolC1t02958H Brassica oleracea HOM05D000675 ORTHO05D018767 1.3e-15 85.9 55 60.0
BolC7t40834H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-15 84.7 50 78.0
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-14 80.5 72 50.0
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-13 78.6 66 51.5
A07p03370 Brassica napus HOM05D000675 ORTHO05D000395 2.0e-13 78.6 72 50.0
A09p51440 Brassica napus HOM05D000675 ORTHO05D000395 3.5e-13 77.8 72 50.0
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 7.8e-13 76.6 65 50.8
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-12 75.9 66 50.0
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-12 75.5 66 50.0
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-12 75.5 72 48.6
Thhalv10029439m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.3e-12 75.1 68 50.0
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-12 74.3 72 47.2
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 6.6e-12 73.6 66 48.5
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 8.6e-12 73.2 66 48.5
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 8.6e-12 73.2 66 47.0
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 1.1e-11 72.8 66 48.5
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 1.9e-11 72.0 72 43.1
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-11 72.0 66 48.5
C04p19400 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-11 72.0 72 43.1
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 1.9e-11 72.0 66 48.5
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-11 71.6 66 47.0
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-11 71.6 35 80.0
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-11 71.2 70 47.1
BcaC02g09509 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-11 71.2 66 47.0
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-11 71.2 66 47.0
BolC7t41640H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-11 71.2 66 48.5
BraA04t16728Z Brassica rapa HOM05D000675 ORTHO05D000395 3.3e-11 71.2 66 48.5
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 4.3e-11 70.9 66 47.0
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 4.3e-11 70.9 66 47.0
BcaC02g07514 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-11 70.5 72 45.8
BolC4t28102H Brassica oleracea HOM05D000675 ORTHO05D000395 5.6e-11 70.5 72 45.8
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.6e-11 70.5 66 48.5
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-11 70.1 66 47.0
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 7.3e-11 70.1 72 44.4
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 7.3e-11 70.1 66 47.0
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 7.3e-11 70.1 66 47.0
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 9.5e-11 69.7 66 45.5
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 1.2e-10 69.3 66 47.0
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-10 68.9 66 48.5
BolC1t04031H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-10 68.9 72 45.8
CARHR150440 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.6e-10 68.9 66 45.5
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-10 68.6 65 46.2
C06p46010 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-10 68.6 62 50.0
C05p25460 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-10 68.2 64 50.0
Thhalv10015760m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.8e-10 68.2 66 47.0
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-10 67.8 66 45.5
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-10 67.8 66 45.5
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-10 67.8 66 48.5
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 3.6e-10 67.8 69 49.3
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 4.7e-10 67.4 66 45.5
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 4.7e-10 67.4 66 42.4
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 4.7e-10 67.4 66 45.5
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 4.7e-10 67.4 66 47.0
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-10 67.0 66 45.5
Thhalv10027512m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.1e-10 67.0 66 47.0
Thhalv10029293m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.1e-10 67.0 66 45.5
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-10 66.6 66 48.5
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 8.0e-10 66.6 66 45.5
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-09 66.2 66 40.9
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 1.0e-09 66.2 58 51.7
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-09 66.2 66 45.5
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 1.0e-09 66.2 65 44.6
Thhalv10024063m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-09 66.2 66 43.9
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-09 65.9 64 48.4
A08p07920 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-09 65.9 66 47.0
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-09 65.9 65 50.8
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-09 65.9 62 50.0
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 1.4e-09 65.9 61 50.8
A01p19470 Brassica napus HOM05D000675 ORTHO05D021814 1.8e-09 65.5 66 43.9
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-09 65.5 66 45.5
Carub.0008s0715 Capsella rubella HOM05D000675 ORTHO05D000395 2.3e-09 65.1 66 42.4
Sp3g28800 Schrenkiella parvula HOM05D000675 ORTHO05D000395 2.3e-09 65.1 67 46.3
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-09 64.7 66 43.9
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 3.1e-09 64.7 66 45.5
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 3.1e-09 64.7 66 43.9
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 3.1e-09 64.7 66 45.5
Thhalv10012388m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.1e-09 64.7 66 43.9
A05p25780 Brassica napus HOM05D000675 ORTHO05D000395 5.2e-09 63.9 65 43.1
BcaB03g15593 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-09 63.5 66 43.9
BcaB06g25860 Brassica carinata HOM05D000675 ORTHO05D000395 6.8e-09 63.5 66 43.9
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 6.8e-09 63.5 61 49.2
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 6.8e-09 63.5 66 42.4
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 8.9e-09 63.2 66 43.9
Carub.0002s1170 Capsella rubella HOM05D000675 ORTHO05D000395 1.2e-08 62.8 66 42.4
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-08 62.4 66 42.4
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-08 62.4 66 43.9
BraA05t19895Z Brassica rapa HOM05D000675 ORTHO05D000395 1.5e-08 62.4 66 45.5
Thhalv10002281m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.0e-08 62.0 66 42.4
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-08 61.6 66 48.5
A09p50420 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-08 61.6 56 44.6
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 3.4e-08 61.2 66 42.4
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-08 60.8 65 50.8
C03p78160 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-08 60.8 54 46.3
C05p51330 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-08 60.8 43 60.5
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 4.4e-08 60.8 54 46.3
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 4.4e-08 60.8 66 47.0
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 5.8e-08 60.5 59 47.5
A10p26180 Brassica napus HOM05D000675 ORTHO05D000395 5.8e-08 60.5 48 56.2
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 5.8e-08 60.5 35 71.4
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 5.8e-08 60.5 66 42.4
C06p36620 Brassica napus HOM05D000675 ORTHO05D000395 5.8e-08 60.5 66 40.9
BcaC02g10974 Brassica carinata HOM05D000675 ORTHO05D000395 7.5e-08 60.1 66 45.5
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 7.5e-08 60.1 65 50.8
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 7.5e-08 60.1 65 50.8
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 7.5e-08 60.1 65 50.8
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 7.5e-08 60.1 65 50.8
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 9.8e-08 59.7 68 42.6
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 9.8e-08 59.7 66 42.4
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 9.8e-08 59.7 66 42.4
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 9.8e-08 59.7 66 45.5
Thhalv10012358m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.8e-08 59.7 62 48.4
BcaC06g34268 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-07 58.9 53 50.9
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-07 58.5 60 43.3
C04p27860 Brassica napus HOM05D000675 ORTHO05D000395 2.2e-07 58.5 33 72.7
Thhalv10012362m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.2e-07 58.5 56 44.6
AL1G57250 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.9e-07 58.2 65 33.8
AL4G30840 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.9e-07 58.2 63 44.4
BolC4t25485H Brassica oleracea HOM05D000675 ORTHO05D000395 2.9e-07 58.2 67 41.8
CARHR286300 Cardamine hirsuta HOM05D000675 ORTHO05D000395 2.9e-07 58.2 63 42.9
BcaC05g29077 Brassica carinata HOM05D000675 ORTHO05D031848 4.9e-07 57.4 66 50.0
A09p30140 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-07 57.4 56 42.9
BraA07t28286Z Brassica rapa HOM05D000675 ORTHO05D000395 6.4e-07 57.0 66 39.4
Carub.0006s2657 Capsella rubella HOM05D000675 ORTHO05D000395 6.4e-07 57.0 66 40.9
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-07 56.6 35 62.9
BcaB04g17681 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-07 56.6 66 40.9
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 8.3e-07 56.6 64 45.3
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 8.3e-07 56.6 64 45.3
C03p49550 Brassica napus HOM05D000675 ORTHO05D040856 1.1e-06 56.2 54 48.1
BraA01t02216Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-06 56.2 66 39.4
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.4e-06 55.8 63 38.1
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 1.9e-06 55.5 66 40.9
AT1G36970 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 1.9e-06 55.5 66 42.4
BolC2t07407H Brassica oleracea HOM05D000675 ORTHO05D040856 1.9e-06 55.5 48 54.2
BcaB08g36276 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-06 55.1 67 43.3
BolC4t24606H Brassica oleracea HOM05D000675 ORTHO05D000395 2.4e-06 55.1 56 46.4
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 3.2e-06 54.7 35 65.7
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-06 54.3 69 39.1
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-06 54.3 32 71.9
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 4.1e-06 54.3 32 71.9
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 4.1e-06 54.3 32 71.9
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 4.1e-06 54.3 39 59.0
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-06 53.9 67 40.3
BolC1t03531H Brassica oleracea HOM05D000675 ORTHO05D000395 5.4e-06 53.9 34 61.8
Carub.0006s1872 Capsella rubella HOM05D000675 ORTHO05D003044 5.4e-06 53.9 66 36.4
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 7.0e-06 53.5 55 43.6
Thhalv10003323m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.2e-06 53.1 66 36.4


User provided reference genes

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