Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 2.1e-173 612.5 357 100.0
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 2.1e-173 612.5 357 100.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 6.2e-165 584.3 357 95.8
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 5.8e-163 577.8 359 95.0
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 3.3e-158 562.0 357 91.3
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 9.6e-150 533.9 339 93.8
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 2.4e-132 476.1 371 80.9
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 8.7e-127 457.6 362 79.0
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 8.7e-127 457.6 369 78.0
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 3.4e-123 445.7 357 76.5
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.3e-122 443.7 358 78.8
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 2.0e-110 403.3 371 72.2
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 6.1e-104 381.7 371 68.2
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 4.0e-71 272.7 386 52.8
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.3e-50 204.5 381 42.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 6.6e-50 202.2 386 40.2
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 9.6e-49 198.4 376 39.6
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.1e-47 193.4 383 40.5
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 4.0e-47 193.0 382 38.2
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 4.0e-47 193.0 379 43.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 2.9e-45 186.8 392 36.2
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 6.4e-45 185.7 360 43.9
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 1.9e-44 184.1 382 40.3
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 3.2e-44 183.3 340 38.2
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.6e-43 181.0 384 40.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.0e-42 178.3 365 43.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 3.9e-42 176.4 377 41.4
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 8.7e-42 175.3 369 39.8
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.1e-41 174.9 364 35.4
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.9e-41 174.1 374 42.2
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.3e-41 173.3 379 39.6
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 5.6e-41 172.6 381 36.7
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.3e-40 171.4 378 32.8
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 6.2e-40 169.1 385 39.5
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 1.4e-39 167.9 356 43.3
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.1e-39 166.8 365 37.8
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 6.9e-39 165.6 336 33.9
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 2.6e-38 163.7 412 38.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 5.8e-38 162.5 372 39.0
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 9.9e-38 161.8 385 42.3
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.3e-37 161.4 367 38.7
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 3.8e-37 159.8 360 33.9
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 6.4e-37 159.1 378 38.6
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.4e-37 159.1 341 38.7
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 8.4e-37 158.7 293 38.9
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.4e-36 157.9 341 37.8
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.9e-36 157.5 367 38.1
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 5.4e-36 156.0 363 39.9
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 5.4e-36 156.0 376 34.8
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 2.7e-35 153.7 397 33.8
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.7e-35 153.7 371 35.0
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 3.5e-35 153.3 368 41.6
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.0e-34 151.8 384 34.4
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.3e-34 151.4 384 33.9
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.8e-34 151.0 342 37.7
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 8.7e-34 148.7 368 34.5
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.9e-33 147.5 383 35.5
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.9e-33 147.5 382 35.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 2.5e-33 147.1 353 40.5
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 4.3e-33 146.4 412 30.8
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 5.6e-33 146.0 418 31.3
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 7.4e-33 145.6 368 37.8
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 7.4e-33 145.6 401 30.4
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 9.6e-33 145.2 264 38.3
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 6.2e-32 142.5 373 38.6
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 8.1e-32 142.1 366 30.6
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.4e-31 141.4 370 34.9
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.4e-31 140.6 357 36.4
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 4.0e-31 139.8 309 40.8
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.8e-30 136.0 278 36.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 5.8e-30 136.0 409 34.2
BolC3t19970H Brassica oleracea HOM05D005773 ORTHO05D006930 1.7e-29 134.4 192 50.5
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.7e-29 134.4 386 39.1
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.7e-29 134.4 411 34.1
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 6.4e-29 132.5 383 32.1
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 8.4e-29 132.1 361 37.1
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.4e-28 131.3 365 37.8
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.4e-28 131.3 411 33.6
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.9e-28 131.0 380 37.9
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 1.9e-28 131.0 420 34.5
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.4e-28 130.6 266 45.1
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 2.4e-28 130.6 425 31.3
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.7e-27 127.1 380 32.4
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 7.9e-27 125.6 378 34.7
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.0e-26 125.2 362 33.7
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.0e-26 125.2 293 35.5
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.3e-26 124.8 368 37.0
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 1.8e-26 124.4 385 29.4
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 3.0e-26 123.6 368 38.3
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 6.7e-26 122.5 359 36.2
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 4.3e-25 119.8 374 37.2
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.3e-24 118.2 362 33.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.3e-24 118.2 311 35.7
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.6e-24 117.9 365 36.2
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 6.2e-24 115.9 369 36.3
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 8.2e-24 115.5 332 36.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 4.0e-23 113.2 373 35.7
BcaC01g00240 Brassica carinata HOM05D005773 ORTHO05D006930 5.3e-23 112.8 265 35.5
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 2.0e-22 110.9 252 33.7
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-21 108.2 252 44.0
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.7e-21 107.8 356 35.7
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 4.9e-21 106.3 231 33.8
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 2.5e-20 104.0 373 34.9
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 9.3e-20 102.1 370 37.0
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.2e-19 101.7 367 36.8
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 4.6e-19 99.8 97 54.6
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.9e-19 99.0 176 35.8
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.0e-18 98.6 373 34.3
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.9e-18 96.7 52 82.7
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 5.1e-18 96.3 436 27.3
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 8.7e-18 95.5 89 48.3
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.5e-17 94.7 218 31.7
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.8e-16 90.5 89 50.6
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.4e-15 87.4 329 35.3
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 4.1e-15 86.7 365 30.4
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.5e-14 84.7 151 39.7
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.0e-13 82.0 160 38.8
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.0e-13 82.0 406 26.6
BcaB08g34443 Brassica carinata HOM05D005773 ORTHO05D006930 5.0e-13 79.7 65 69.2
BcaB05g23126 Brassica carinata HOM05D005773 ORTHO05D006930 1.6e-11 74.7 99 52.5
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.1e-11 74.3 328 32.9
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.3e-10 71.6 328 32.3
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.9e-09 67.8 56 60.7
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.7e-08 64.7 90 45.6
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 2.4e-07 60.8 45 64.4
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.1e-07 60.1 58 60.3
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 4.1e-07 60.1 90 36.7
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 9.1e-07 58.9 90 43.3
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 1.5e-06 58.2 74 43.2
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.5e-06 58.2 55 60.0
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 2.6e-06 57.4 85 38.8


User provided reference genes

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