Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 1.7e-191 672.5 360 100.0
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 1.7e-191 672.5 360 100.0
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 2.6e-171 605.5 360 91.4
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.0e-170 603.6 360 91.9
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 8.4e-170 600.5 360 90.6
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 4.0e-164 581.6 363 88.4
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 5.5e-153 544.7 359 84.1
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 1.7e-149 533.1 359 82.5
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.5e-147 526.6 361 82.0
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 5.0e-146 521.5 358 82.1
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.7e-144 515.8 362 80.7
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.7e-141 506.5 367 79.0
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.1e-105 387.5 354 64.4
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 7.3e-81 305.1 388 48.5
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 7.3e-81 305.1 388 48.2
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.8e-79 300.4 335 52.2
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 8.9e-79 298.1 389 49.1
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 2.0e-78 297.0 341 51.9
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.6e-78 296.6 387 47.5
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 2.6e-78 296.6 374 47.6
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 9.9e-78 294.7 379 48.8
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.7e-77 293.9 377 46.7
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 2.2e-77 293.5 334 51.2
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 8.4e-77 291.6 247 69.2
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.1e-76 291.2 361 48.5
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 1.1e-76 291.2 362 48.9
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 7.1e-76 288.5 366 48.4
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 7.1e-76 288.5 350 51.7
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 1.6e-75 287.3 367 48.8
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 2.1e-75 287.0 370 48.6
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 2.7e-75 286.6 335 50.4
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.6e-75 285.8 345 50.4
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 4.6e-75 285.8 391 47.1
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 7.8e-75 285.0 350 50.3
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 7.8e-75 285.0 381 48.0
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.0e-74 284.6 362 49.2
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 1.3e-74 284.3 372 48.1
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 3.9e-74 282.7 388 47.2
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 8.7e-74 281.6 373 48.0
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 1.1e-73 281.2 256 59.0
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 1.5e-73 280.8 409 45.0
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 2.5e-73 280.0 374 49.7
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 2.5e-73 280.0 363 48.5
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 3.3e-73 279.6 386 46.9
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 5.6e-73 278.9 379 45.6
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 5.6e-73 278.9 353 49.6
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.3e-72 277.7 345 47.5
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.3e-72 277.7 374 47.1
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 2.8e-72 276.6 381 46.5
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 2.8e-72 276.6 372 48.7
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 2.8e-72 276.6 345 49.6
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 4.8e-72 275.8 385 48.3
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 1.4e-71 274.2 387 45.2
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 1.8e-71 273.9 311 51.4
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 2.4e-71 273.5 346 46.2
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 4.0e-71 272.7 369 46.9
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 4.0e-71 272.7 394 45.9
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 9.0e-71 271.6 377 46.4
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.5e-70 270.8 388 46.1
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 2.0e-70 270.4 355 48.5
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 4.4e-70 269.2 386 44.6
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 5.8e-70 268.9 389 45.2
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 7.6e-70 268.5 385 46.2
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 2.2e-69 266.9 358 47.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 3.8e-69 266.2 365 45.2
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 8.4e-69 265.0 259 56.8
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.4e-68 264.2 364 44.8
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 1.9e-68 263.8 366 46.4
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 5.4e-68 262.3 260 54.2
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 7.1e-68 261.9 267 54.7
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 7.1e-68 261.9 386 43.5
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 3.5e-67 259.6 358 47.5
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 6.0e-67 258.8 394 45.7
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.0e-66 258.1 350 45.4
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.0e-66 258.1 359 46.0
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 3.9e-66 256.1 368 45.7
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 6.6e-66 255.4 266 52.6
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 1.5e-65 254.2 212 60.8
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 7.3e-65 251.9 411 42.1
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 2.8e-64 250.0 343 45.8
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 6.2e-64 248.8 385 44.4
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 3.1e-63 246.5 389 43.4
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 2.2e-61 240.4 301 52.5
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 9.3e-60 235.0 372 42.5
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 3.5e-59 233.0 384 41.4
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 4.6e-59 232.6 382 40.3
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 4.6e-59 232.6 338 41.4
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 1.8e-58 230.7 321 43.6
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.6e-57 225.7 345 44.6
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 2.1e-56 223.8 351 41.9
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 2.8e-56 223.4 263 49.4
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.6e-54 216.9 368 41.0
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.3e-53 214.5 354 41.2
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 4.2e-52 209.5 268 45.5
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 7.9e-51 205.3 263 44.5
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.3e-50 204.5 144 67.4
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 8.7e-50 201.8 220 48.6
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 2.5e-49 200.3 339 41.9
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.1e-47 194.9 326 36.2
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 1.8e-47 194.1 377 35.3
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.3e-45 188.0 249 40.6
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.2e-45 187.2 121 71.1
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.0e-42 176.8 122 68.9
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 3.0e-42 176.8 292 39.4
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.1e-39 168.3 279 43.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 5.9e-38 162.5 282 42.6
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 5.0e-37 159.5 176 53.4
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 1.4e-36 157.9 125 76.8
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 1.9e-28 131.0 180 41.7
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 8.8e-26 122.1 117 56.4
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.4e-23 114.8 227 37.9
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 2.2e-21 107.5 94 72.3
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 4.2e-20 103.2 203 41.4
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 2.6e-17 94.0 232 34.5
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 3.7e-16 90.1 70 58.6
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 6.3e-16 89.4 290 28.6
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 2.4e-15 87.4 77 58.4
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 5.3e-15 86.3 224 29.5
C05p35710 Brassica napus HOM05D024450 ORTHO05D033433 2.8e-08 63.9 232 31.5
A10p09420 Brassica napus HOM05D024450 ORTHO05D033433 4.8e-08 63.2 171 36.3
BraA10t43019Z Brassica rapa HOM05D024450 ORTHO05D033731 4.8e-08 63.2 171 36.3
C05p38850 Brassica napus HOM05D000140 ORTHO05D000087 2.4e-07 60.8 48 68.8
BolC5t32286H Brassica oleracea HOM05D024450 ORTHO05D033433 3.5e-06 57.0 120 39.2


User provided reference genes

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