Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.3e-92 343.2 190 100.0
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.1e-67 258.5 143 93.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 3.0e-57 225.7 149 77.2
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 3.0e-57 225.7 149 77.2
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 3.0e-57 225.7 149 77.2
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 3.0e-57 225.7 149 77.2
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 7.3e-56 221.1 211 60.7
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.6e-55 219.9 146 78.1
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 3.6e-55 218.8 208 60.6
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 4.8e-55 218.4 208 60.6
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 4.8e-55 218.4 143 84.6
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 6.2e-55 218.0 150 74.7
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 6.2e-55 218.0 215 59.1
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.8e-54 216.5 152 73.7
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.8e-54 216.5 152 73.7
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 4.0e-54 215.3 153 73.9
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 1.2e-53 213.8 143 77.6
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 9.3e-51 204.1 214 57.0
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.8e-47 192.6 146 68.5
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 2.8e-47 192.6 145 70.3
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 4.8e-47 191.8 145 70.3
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 8.1e-47 191.0 145 69.7
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.4e-46 190.3 143 70.6
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 3.1e-46 189.1 146 67.8
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 5.3e-46 188.3 142 69.7
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 6.9e-46 188.0 144 67.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.5e-45 186.8 143 70.6
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 2.6e-45 186.0 143 67.1
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 3.4e-45 185.7 143 69.9
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 5.8e-45 184.9 144 67.4
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 9.9e-45 184.1 148 67.6
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 9.9e-45 184.1 143 69.2
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 9.9e-45 184.1 143 67.1
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.3e-44 183.7 143 68.5
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.3e-44 183.7 143 68.5
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.3e-44 183.7 143 68.5
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 1.3e-44 183.7 143 69.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.7e-44 183.3 143 67.1
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.2e-44 183.0 143 69.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 2.2e-44 183.0 143 68.5
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 2.2e-44 183.0 146 67.1
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 2.9e-44 182.6 143 69.9
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.9e-44 182.6 144 68.8
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.9e-44 182.6 144 68.8
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.9e-44 182.6 144 68.8
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.9e-44 182.6 144 68.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 2.9e-44 182.6 143 67.8
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 2.9e-44 182.6 143 66.4
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 2.9e-44 182.6 146 65.8
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.8e-44 182.2 143 69.2
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 3.8e-44 182.2 144 67.4
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 4.9e-44 181.8 145 66.2
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 6.4e-44 181.4 143 65.0
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 6.4e-44 181.4 153 65.4
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 6.4e-44 181.4 147 68.0
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 6.4e-44 181.4 143 67.1
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 8.4e-44 181.0 143 67.1
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-43 180.6 143 66.4
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.1e-43 180.6 150 66.0
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.1e-43 180.6 146 66.4
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 1.1e-43 180.6 143 67.1
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.4e-43 180.3 155 64.5
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.4e-43 180.3 144 68.1
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 1.4e-43 180.3 145 67.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 1.4e-43 180.3 145 68.3
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.4e-43 179.5 144 68.8
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 2.4e-43 179.5 142 66.2
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.4e-43 179.5 145 66.2
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 2.4e-43 179.5 148 66.2
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 4.2e-43 178.7 143 65.7
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 4.2e-43 178.7 148 65.5
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 5.5e-43 178.3 143 65.7
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 5.5e-43 178.3 146 66.4
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-43 177.9 143 65.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-43 177.9 143 65.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 7.1e-43 177.9 143 65.0
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 7.1e-43 177.9 149 64.4
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 7.1e-43 177.9 149 64.4
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.2e-42 177.2 143 67.1
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.2e-42 177.2 145 66.9
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 1.2e-42 177.2 151 65.6
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.2e-42 177.2 143 65.0
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.6e-42 176.8 144 65.3
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 2.7e-42 176.0 143 67.1
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 3.5e-42 175.6 142 66.2
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 6.0e-42 174.9 141 65.2
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.3e-41 172.9 143 65.7
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.3e-41 172.9 143 65.7
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 3.9e-41 172.2 143 65.0
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 5.1e-41 171.8 142 63.4
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 8.7e-41 171.0 142 64.8
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 4.3e-40 168.7 143 62.9
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 4.3e-40 168.7 146 62.3
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 6.9e-38 161.4 142 62.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.7e-33 144.8 141 54.6
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.9e-32 143.3 143 59.4
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 3.1e-30 136.0 127 55.9
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 5.3e-30 135.2 103 68.0
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.0e-29 133.3 111 64.9
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.6e-29 132.9 143 49.0
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 3.4e-29 132.5 143 50.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 5.9e-29 131.7 115 62.6
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 1.3e-28 130.6 115 60.9
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 5.0e-28 128.6 110 63.6
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 8.4e-28 127.9 110 63.6
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.1e-27 127.5 144 47.9
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 5.5e-27 125.2 116 60.3
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 3.0e-25 119.4 141 48.2
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 6.5e-20 101.7 131 46.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.0e-17 94.4 96 50.0
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.4e-14 84.0 140 38.6
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 3.1e-14 82.8 63 65.1
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 5.5e-11 72.0 46 73.9
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.7e-10 68.9 67 52.2


User provided reference genes

Program Settings