Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p03980 Brassica napus HOM05D000137 ORTHO05D012927 9.2e-47 189.9 97 100.0
BraA08t32427Z Brassica rapa HOM05D000137 ORTHO05D012927 9.2e-47 189.9 97 100.0
A10p17990 Brassica napus HOM05D000137 ORTHO05D012927 7.8e-38 160.2 137 68.6
C03p51850 Brassica napus HOM05D000137 ORTHO05D012927 4.8e-27 124.4 145 57.9
BraA04t16450Z Brassica rapa HOM05D000137 ORTHO05D012927 4.8e-27 124.4 148 55.4
BcaC01g03577 Brassica carinata HOM05D000137 ORTHO05D012927 2.0e-25 119.0 72 91.7
C03p50960 Brassica napus HOM05D000137 ORTHO05D012927 2.0e-25 119.0 72 91.7
BcaC06g36043 Brassica carinata HOM05D000137 ORTHO05D012927 4.5e-25 117.9 68 94.1
C08p43520 Brassica napus HOM05D000137 ORTHO05D000503 6.4e-24 114.0 72 88.9
BolC8t51898H Brassica oleracea HOM05D000137 ORTHO05D000503 6.4e-24 114.0 72 88.9
A09p60080 Brassica napus HOM05D000137 ORTHO05D000503 4.2e-23 111.3 72 87.5
BraA09t41377Z Brassica rapa HOM05D000137 ORTHO05D000503 4.2e-23 111.3 72 87.5
AL1G30520 Arabidopsis lyrata HOM05D000137 ORTHO05D000503 7.9e-22 107.1 149 49.7
Thhalv10007165m.g Eutrema salsugineum HOM05D000137 ORTHO05D000503 1.0e-21 106.7 149 49.7
AT1G18150 Arabidopsis thaliana HOM05D000137 ORTHO05D000503 1.8e-21 105.9 149 49.0
C02p11050 Brassica napus HOM05D000137 ORTHO05D012927 1.8e-21 105.9 145 52.4
BcaC03g13899 Brassica carinata HOM05D000137 ORTHO05D012927 5.1e-21 104.4 120 58.3
A01p00480 Brassica napus HOM05D000137 ORTHO05D012927 5.1e-21 104.4 145 51.7
BcaC02g11567 Brassica carinata HOM05D000137 ORTHO05D012927 6.7e-21 104.0 110 62.7
C08p18440 Brassica napus HOM05D000137 ORTHO05D000503 1.6e-19 99.4 148 46.6
BolC2t07177H Brassica oleracea HOM05D000137 ORTHO05D012927 1.6e-19 99.4 58 94.8
CARHR018710 Cardamine hirsuta HOM05D000137 ORTHO05D000503 2.1e-19 99.0 72 80.6
A06p14170 Brassica napus HOM05D000137 ORTHO05D000503 1.8e-18 95.9 68 79.4
Sp1g16140 Schrenkiella parvula HOM05D000137 ORTHO05D000503 1.8e-18 95.9 72 79.2
A08p21540 Brassica napus HOM05D018440 ORTHO05D012927 5.3e-18 94.4 81 70.4
Carub.0001s1779 Capsella rubella HOM05D000137 ORTHO05D000503 6.9e-18 94.0 149 45.6
BraA06t24549Z Brassica rapa HOM05D000137 ORTHO05D000503 9.0e-18 93.6 68 79.4
BcaB07g31828 Brassica carinata HOM05D000137 ORTHO05D000503 2.6e-17 92.0 68 77.9
BcaNung05434 Brassica carinata HOM05D000137 ORTHO05D000503 4.5e-17 91.3 72 72.2
C05p16450 Brassica napus HOM05D000137 ORTHO05D000503 1.1e-15 86.7 62 79.0
BcaC07g41343 Brassica carinata HOM05D000137 ORTHO05D000503 4.2e-15 84.7 149 46.3
THA.LOC104812163 Tarenaya hassleriana HOM05D000137 ORTHO05D000503 1.0e-13 80.1 149 41.6
Aa31LG7G2930 Aethionema arabicum HOM05D000137 ORTHO05D000503 3.0e-13 78.6 75 64.0
AL2G33460 Arabidopsis lyrata HOM05D000137 ORTHO05D000503 1.1e-12 76.6 154 44.2
Carub.0002s2042 Capsella rubella HOM05D000137 ORTHO05D000503 4.3e-12 74.7 79 63.3
BcaC08g45628 Brassica carinata HOM05D000137 ORTHO05D000503 6.3e-11 70.9 74 62.2
C06p33910 Brassica napus HOM05D000137 ORTHO05D000503 6.3e-11 70.9 74 62.2
BolC6t38504H Brassica oleracea HOM05D000137 ORTHO05D000503 6.3e-11 70.9 74 62.2
BcaC05g25706 Brassica carinata HOM05D000137 ORTHO05D000503 8.2e-11 70.5 53 73.6
BolC5t30341H Brassica oleracea HOM05D000137 ORTHO05D000503 8.2e-11 70.5 53 73.6
Aa31LG4G3980 Aethionema arabicum HOM05D000137 ORTHO05D000503 1.4e-10 69.7 152 41.4
A07p29730 Brassica napus HOM05D000137 ORTHO05D000503 1.8e-10 69.3 74 60.8
BcaB03g15722 Brassica carinata HOM05D000137 ORTHO05D000503 3.1e-10 68.6 75 60.0
BcaC07g38904 Brassica carinata HOM05D000137 ORTHO05D000503 3.1e-10 68.6 46 80.4
BcaNung07349 Brassica carinata HOM05D000137 ORTHO05D000503 3.1e-10 68.6 75 60.0
AT1G73670 Arabidopsis thaliana HOM05D000137 ORTHO05D000503 5.3e-10 67.8 154 40.9
Sp5g28850 Schrenkiella parvula HOM05D000137 ORTHO05D000503 1.2e-09 66.6 149 38.9
BraA07t30612Z Brassica rapa HOM05D000137 ORTHO05D000503 2.0e-09 65.9 74 59.5
THA.LOC104813920 Tarenaya hassleriana HOM05D000137 ORTHO05D000503 1.0e-08 63.5 52 71.2
Duzib068G0456 Durio zibethinus HOM05D000137 ORTHO05D000503 5.5e-07 57.8 113 38.9
Prupe.5G231400 Prunus persica HOM05D000137 ORTHO05D000503 2.7e-06 55.5 155 33.5
Actinidia39847 Actinidia chinensis HOM05D000137 ORTHO05D014725 6.1e-06 54.3 104 40.4
MD06G1230300 Malus domestica HOM05D000137 ORTHO05D000503 6.1e-06 54.3 158 34.8


User provided reference genes

Program Settings