Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 2.2e-148 528.9 259 100.0
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 3.6e-114 415.2 255 83.5
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 2.7e-109 399.1 255 80.4
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 2.7e-109 399.1 255 80.4
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 4.0e-97 358.6 207 84.5
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 5.8e-96 354.8 206 84.0
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 9.9e-96 354.0 209 83.7
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 4.2e-94 348.6 206 83.5
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 6.6e-92 341.3 259 69.9
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 5.6e-91 338.2 208 80.8
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 1.6e-90 336.7 208 80.8
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 1.3e-87 327.0 255 69.4
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.1e-81 307.4 200 74.0
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.1e-78 297.4 200 72.5
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 2.6e-72 276.2 155 80.0
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 1.7e-71 273.5 221 60.6
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 4.2e-70 268.9 196 68.4
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 1.2e-69 267.3 201 63.7
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 1.2e-69 267.3 198 66.7
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 2.7e-69 266.2 198 64.6
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 1.0e-68 264.2 196 64.3
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 1.0e-68 264.2 198 64.1
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 1.0e-68 264.2 198 64.1
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 3.0e-68 262.7 182 67.6
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 5.1e-68 261.9 156 76.3
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 5.1e-68 261.9 172 71.5
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 1.9e-67 260.0 203 62.1
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 3.3e-67 259.2 198 63.6
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 4.3e-67 258.8 196 66.3
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 9.6e-67 257.7 223 58.7
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 1.3e-66 257.3 196 63.3
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 1.3e-66 257.3 151 74.8
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 2.1e-66 256.5 155 74.2
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 4.8e-66 255.4 161 72.7
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 4.8e-66 255.4 145 75.9
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 4.8e-66 255.4 165 71.5
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 4.8e-66 255.4 160 72.5
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 4.8e-66 255.4 187 67.9
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 6.2e-66 255.0 195 64.1
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 1.1e-65 254.2 186 62.9
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 1.4e-65 253.8 148 75.7
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 1.8e-65 253.4 155 74.2
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 3.1e-65 252.7 146 76.0
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 4.0e-65 252.3 171 68.4
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 2.0e-64 250.0 145 76.6
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.6e-64 249.6 176 67.0
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 2.6e-64 249.6 195 64.1
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 2.6e-64 249.6 147 75.5
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 3.4e-64 249.2 146 75.3
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 3.4e-64 249.2 196 60.2
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 5.8e-64 248.4 146 76.0
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 7.6e-64 248.1 146 76.7
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 1.0e-63 247.7 158 71.5
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 1.0e-63 247.7 204 60.8
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 3.8e-63 245.7 195 61.5
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 1.1e-62 244.2 146 74.0
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 1.4e-62 243.8 207 59.4
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 1.4e-62 243.8 201 60.7
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 1.9e-62 243.4 146 74.7
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 1.9e-62 243.4 145 75.9
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 1.9e-62 243.4 145 75.9
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 2.5e-62 243.0 158 70.9
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 2.5e-62 243.0 145 75.9
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 3.2e-62 242.7 152 74.3
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 3.2e-62 242.7 146 74.7
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 3.2e-62 242.7 152 70.4
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 5.5e-62 241.9 145 75.2
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 7.1e-62 241.5 195 62.6
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 1.2e-61 240.7 144 75.0
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 2.7e-61 239.6 147 72.8
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 3.5e-61 239.2 151 71.5
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 6.0e-61 238.4 146 74.0
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 1.8e-60 236.9 145 70.3
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 1.8e-60 236.9 152 68.4
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 3.0e-60 236.1 144 72.9
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 1.5e-59 233.8 147 70.7
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 1.9e-59 233.4 152 68.4
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 1.9e-59 233.4 152 68.4
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 2.5e-59 233.0 190 61.6
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 4.3e-59 232.3 146 71.2
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 4.8e-58 228.8 162 66.7
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 6.3e-58 228.4 147 70.7
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 2.4e-57 226.5 146 67.1
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 8.5e-55 218.0 125 76.8
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 1.1e-54 217.6 188 58.5
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.9e-54 216.9 198 57.6
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 4.2e-54 215.7 124 78.2
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 1.2e-53 214.2 153 62.7
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.6e-53 213.8 152 63.8
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 6.1e-53 211.8 232 50.9
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 1.4e-52 210.7 124 74.2
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 3.9e-52 209.1 194 57.2
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 3.9e-52 209.1 194 57.2
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 1.1e-51 207.6 137 70.1
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 3.7e-50 202.6 148 66.9
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 3.7e-50 202.6 142 62.7
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 1.1e-49 201.1 162 60.5
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 1.8e-49 200.3 186 55.4
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 7.7e-48 194.9 151 61.6
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 2.9e-47 193.0 142 64.8
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 6.5e-47 191.8 125 68.0
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 1.9e-46 190.3 145 55.9
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 4.7e-45 185.7 145 58.6
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 1.0e-44 184.5 139 62.6
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 1.0e-44 184.5 152 57.9
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 2.6e-43 179.9 155 56.1
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 9.7e-43 177.9 113 73.5
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 9.7e-43 177.9 146 56.8
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.3e-42 177.6 100 77.0
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 1.1e-41 174.5 101 77.2
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 1.4e-41 174.1 99 75.8
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 2.4e-41 173.3 133 57.9
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 2.4e-41 173.3 144 57.6
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 9.1e-41 171.4 146 56.2
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 2.6e-40 169.9 108 72.2
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 1.7e-39 167.2 120 60.0
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 5.0e-39 165.6 114 64.9
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 3.2e-38 162.9 108 65.7
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 7.2e-38 161.8 123 61.0
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 7.2e-38 161.8 123 61.0
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 6.3e-34 148.7 146 51.4
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 9.1e-33 144.8 118 52.5
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 2.6e-32 143.3 123 58.5
EL10Ac6g14578 Beta vulgaris HOM05D002842 ORTHO05D003177 1.3e-26 124.4 72 77.8
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 2.2e-26 123.6 119 50.4
EL10Ac5g10908 Beta vulgaris HOM05D005182 ORTHO05D006631 3.7e-26 122.9 72 76.4
EL10Ac6g13785 Beta vulgaris HOM05D005182 ORTHO05D006631 8.3e-26 121.7 72 76.4
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 8.3e-26 121.7 161 39.8
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 3.1e-25 119.8 74 67.6
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 2.2e-23 113.6 68 72.1
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 6.5e-23 112.1 85 60.0
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 1.1e-22 111.3 75 60.0
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 3.6e-21 106.3 85 61.2
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 9.8e-19 98.2 63 68.3
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.3e-18 97.8 90 51.1
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 2.8e-18 96.7 58 74.1
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 6.3e-18 95.5 64 65.6
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 4.1e-17 92.8 61 65.6
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 5.4e-17 92.4 73 58.9
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 1.2e-16 91.3 63 63.5
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 5.5e-14 82.4 80 48.8
Zm00001eb085260 Zea mays HOM05D005182 ORTHO05D006631 3.7e-10 69.7 48 62.5
Dinv33459 Davidia involucrata HOM05D005182 ORTHO05D006631 5.9e-08 62.4 42 69.0
RcHm_v2.0_Chr7g0228091 Rosa chinensis HOM05D005182 ORTHO05D344069 1.9e-06 57.4 96 35.4


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