Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.5e-190 668.7 355 100.0
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 9.4e-190 666.8 355 99.7
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 5.2e-188 661.0 359 98.6
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 5.2e-188 661.0 359 98.6
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 4.8e-186 654.4 359 97.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 5.5e-182 641.0 356 96.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 8.6e-175 617.1 363 92.0
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 7.3e-174 614.0 362 90.6
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.0e-172 608.2 362 90.3
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 6.8e-172 607.4 366 89.9
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 3.4e-171 605.1 364 89.8
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 8.3e-170 600.5 366 89.3
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 7.5e-163 577.4 362 84.5
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.6e-152 543.1 357 79.3
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.9e-142 509.6 352 73.6
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 7.3e-142 507.7 359 73.8
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.2e-141 506.9 345 76.5
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.8e-140 503.1 357 74.2
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 4.0e-140 501.9 357 72.5
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 5.3e-140 501.5 345 74.2
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 5.3e-140 501.5 356 73.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 6.9e-140 501.1 351 74.6
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 6.9e-140 501.1 330 77.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.2e-139 500.4 351 74.4
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.4e-139 498.8 353 72.8
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 4.4e-139 498.4 351 74.1
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 4.4e-139 498.4 351 74.1
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 9.9e-139 497.3 357 72.3
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.9e-138 495.7 351 73.8
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.9e-137 493.0 358 72.3
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 7.1e-137 491.1 346 72.5
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 9.3e-137 490.7 351 73.5
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 1.2e-136 490.3 343 74.3
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.6e-136 490.0 332 76.5
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 2.1e-136 489.6 351 72.1
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.7e-136 489.2 333 76.3
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 6.0e-136 488.0 336 74.7
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.3e-135 486.9 339 73.5
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.0e-135 485.7 336 73.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.0e-135 485.7 337 76.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 3.0e-135 485.7 362 70.7
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 3.9e-135 485.3 336 74.1
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 5.1e-135 485.0 346 71.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 6.6e-135 484.6 333 73.9
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.6e-134 481.5 336 74.4
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 7.3e-134 481.1 333 76.0
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.3e-133 480.3 344 71.2
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.8e-133 479.2 358 70.1
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 1.1e-132 477.2 359 71.0
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.1e-132 477.2 371 67.7
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.8e-132 476.5 344 72.4
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 4.0e-132 475.3 371 67.4
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 5.3e-132 474.9 333 74.5
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 9.0e-132 474.2 348 72.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 9.0e-132 474.2 351 70.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.8e-131 471.5 353 69.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.7e-130 469.9 348 71.3
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.2e-130 469.5 333 74.2
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 70.4
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.9e-130 469.2 342 70.5
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 3.8e-130 468.8 348 70.1
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 8.4e-130 467.6 353 68.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 8.4e-130 467.6 347 70.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.1e-129 467.2 360 71.4
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.9e-129 466.5 356 69.7
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.4e-129 466.1 347 71.8
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 4.2e-129 465.3 336 71.4
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.2e-129 465.3 346 71.7
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.2e-128 463.8 357 69.7
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.6e-128 463.4 346 69.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 2.1e-128 463.0 347 71.5
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 4.6e-128 461.8 353 69.4
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.3e-127 459.5 348 71.0
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.9e-127 458.8 333 71.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 6.7e-127 458.0 338 71.0
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.1e-126 457.2 348 69.0
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 4.3e-126 455.3 328 73.8
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.6e-126 454.9 360 70.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 5.6e-126 454.9 335 72.8
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 4.8e-125 451.8 358 69.8
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.9e-122 442.6 334 66.8
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.9e-122 442.6 361 65.9
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 6.7e-119 431.4 335 68.4
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 8.7e-119 431.0 357 67.5
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 2.5e-118 429.5 330 67.3
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.6e-117 426.8 334 67.1
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 4.8e-117 425.2 298 75.2
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 7.6e-115 417.9 269 77.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.9e-114 416.0 269 77.3
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.1e-112 409.8 329 60.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 8.7e-111 404.4 328 61.0
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.4e-100 370.5 373 56.6
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 5.3e-100 368.6 285 67.7
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 3.4e-99 365.9 334 58.1
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.9e-81 307.0 242 67.8
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.2e-81 306.2 287 60.3
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.1e-73 281.2 353 46.5
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 6.8e-71 271.9 269 56.9
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 9.8e-70 268.1 340 46.2
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 9.1e-68 261.5 243 57.2
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 4.5e-67 259.2 228 63.2
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.8e-63 247.3 303 47.9
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.7e-62 242.3 155 80.0
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.4e-60 237.7 355 46.5
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.4e-60 237.7 330 44.2
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.4e-55 221.1 191 61.8
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 5.2e-55 219.2 198 59.1
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.0e-51 207.2 186 62.9
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 4.1e-44 183.0 185 52.4
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.1e-41 174.9 140 65.0
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.3e-41 172.9 143 58.7
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 8.1e-40 168.7 261 42.1
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.8e-39 165.6 91 92.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.6e-34 148.7 114 65.8
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.9e-31 138.7 131 55.7
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.8e-23 114.4 66 84.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.4e-21 105.9 57 91.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.3e-16 91.7 126 48.4
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.1e-16 90.9 86 53.5
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 8.4e-13 79.0 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 3.2e-12 77.0 46 82.6
C06p06150 Brassica napus HOM05D047594 ORTHO05D040577 4.0e-07 60.1 35 85.7
BolC6t35726H Brassica oleracea HOM05D047594 ORTHO05D040577 4.0e-07 60.1 35 85.7


User provided reference genes

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