Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p02170 Brassica napus HOM05D010933 ORTHO05D013136 1.6e-41 172.2 79 100.0
BraA08t32264Z Brassica rapa HOM05D010933 ORTHO05D013136 1.4e-40 169.1 79 98.7
BolC3t21384H Brassica oleracea HOM05D010933 ORTHO05D013136 1.5e-39 165.6 80 97.5
C03p90620 Brassica napus HOM05D010933 ORTHO05D013136 9.9e-39 162.9 80 95.0
BcaC01g01321 Brassica carinata HOM05D010933 ORTHO05D013136 1.1e-37 159.5 75 96.0
BcaC01g01322 Brassica carinata HOM05D010933 ORTHO05D013136 1.1e-37 159.5 75 96.0
Sp1g38930 Schrenkiella parvula HOM05D010933 ORTHO05D013136 1.2e-31 139.4 82 84.1
BcaB04g17155 Brassica carinata HOM05D010933 ORTHO05D013136 2.4e-29 131.7 75 81.3
CARHR042480 Cardamine hirsuta HOM05D010933 ORTHO05D013136 2.3e-27 125.2 75 77.3
AT1G52342 Arabidopsis thaliana HOM05D010933 ORTHO05D013136 1.9e-26 122.1 89 69.7
AL1G60560 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 4.3e-26 120.9 82 73.2
AL4G13500 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 3.6e-25 117.9 83 73.5
BcaC08g43411 Brassica carinata HOM05D010933 ORTHO05D013136 5.8e-23 110.5 75 72.0
C06p13920 Brassica napus HOM05D010933 ORTHO05D013136 2.2e-22 108.6 73 72.6
Carub.0001s4134 Capsella rubella HOM05D010933 ORTHO05D013136 1.2e-15 86.3 87 56.3
Aa31LG10G2570 Aethionema arabicum HOM05D010933 ORTHO05D013136 9.6e-10 66.6 33 78.8
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 3.1e-08 61.6 74 43.2
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 5.3e-08 60.8 44 59.1
CsaV3_7G033200 Cucumis sativus L. HOM05D010933 ORTHO05D013136 1.2e-07 59.7 82 40.2
Ah.14g081870 Amaranthus hybridus HOM05D007609 ORTHO05D009539 2.0e-07 58.9 53 49.1
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 3.4e-07 58.2 77 40.3
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 5.8e-07 57.4 30 70.0
MELO3C024233.2 Cucumis melo HOM05D010933 ORTHO05D013136 1.3e-06 56.2 82 39.0
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 1.3e-06 56.2 55 50.9
Sed0016972 Sechium edule HOM05D007609 ORTHO05D009539 4.9e-06 54.3 71 42.3
Medtr8g083460 Medicago truncatula HOM05D007609 ORTHO05D009539 6.4e-06 53.9 78 43.6
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 8.4e-06 53.5 33 63.6
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 8.4e-06 53.5 35 57.1


User provided reference genes

Program Settings