Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 3.8e-100 368.2 192 100.0
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 4.3e-96 354.8 192 96.9
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 2.1e-95 352.4 193 96.9
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 2.1e-95 352.4 192 95.8
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 9.0e-94 347.1 187 96.3
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 3.5e-90 335.1 192 90.1
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 1.7e-84 316.2 192 86.5
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 4.9e-84 314.7 200 85.0
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 4.6e-82 308.1 200 84.0
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 1.3e-81 306.6 200 83.0
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 1.1e-80 303.5 200 83.0
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 3.3e-80 302.0 200 82.5
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 1.6e-79 299.7 192 83.3
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 8.2e-71 270.8 155 89.0
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 1.4e-67 260.0 172 80.8
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 5.5e-67 258.1 161 87.6
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 6.1e-50 201.4 205 59.5
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 2.3e-49 199.5 200 59.0
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 3.9e-49 198.7 200 59.0
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 1.5e-48 196.8 200 58.5
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 1.5e-48 196.8 200 58.5
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 5.0e-44 181.8 189 54.5
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 1.9e-43 179.9 94 98.9
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 8.8e-41 171.0 199 51.3
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 7.4e-40 167.9 199 50.3
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 7.4e-40 167.9 199 50.3
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 2.6e-37 159.5 98 82.7
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 8.0e-34 147.9 209 45.0
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 5.2e-33 145.2 196 48.0
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 6.7e-33 144.8 196 48.0
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 4.4e-32 142.1 115 66.1
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 7.5e-32 141.4 196 48.0
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 1.4e-30 137.1 102 69.6
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 1.6e-29 133.7 196 45.4
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 2.0e-29 133.3 196 45.4
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 2.7e-29 132.9 186 49.5
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 8.5e-28 127.9 198 44.9
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 1.1e-27 127.5 102 65.7
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 5.2e-25 118.6 188 44.7
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 2.6e-24 116.3 188 44.1
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 2.6e-24 116.3 188 44.1
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 2.2e-23 113.2 185 42.7
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 6.3e-23 111.7 185 42.7
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 8.3e-23 111.3 185 42.7
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 2.4e-22 109.8 179 44.1
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 2.7e-21 106.3 197 41.1
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 3.8e-20 102.4 182 42.9
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 9.5e-19 97.8 192 38.0
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 1.6e-18 97.1 176 41.5
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 1.2e-16 90.9 206 35.9
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 5.7e-16 88.6 185 36.2
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 1.2e-13 80.9 198 36.9
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 1.1e-11 74.3 184 37.5
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 1.5e-11 73.9 91 52.7
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 1.5e-11 73.9 184 38.0
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 3.3e-11 72.8 184 37.0
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 4.3e-11 72.4 184 37.5
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 4.3e-11 72.4 184 37.5
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 7.3e-11 71.6 114 40.4
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 6.1e-10 68.6 77 54.5
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 4.4e-08 62.4 174 34.5


User provided reference genes

Program Settings