Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 1.1e-139 500.0 252 100.0
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 9.5e-136 486.9 246 99.6
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 2.3e-134 482.3 246 98.4
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 2.2e-132 475.7 246 97.6
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 1.4e-94 350.1 249 74.7
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 1.4e-94 350.1 249 74.7
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 4.0e-94 348.6 249 73.5
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 7.6e-85 317.8 261 67.0
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 6.5e-84 314.7 253 68.0
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 4.1e-70 268.9 136 99.3
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 1.5e-69 266.9 269 56.9
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 2.5e-59 233.0 249 53.4
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 3.9e-57 225.7 202 63.4
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 1.5e-56 223.8 200 63.0
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 5.7e-56 221.9 129 85.3
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 3.7e-55 219.2 200 62.5
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 1.6e-53 213.8 200 61.5
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 2.0e-53 213.4 202 61.4
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 3.8e-52 209.1 201 60.2
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 6.5e-52 208.4 201 59.7
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 6.5e-52 208.4 201 59.7
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 7.2e-51 204.9 201 59.2
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 2.1e-50 203.4 218 56.0
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 1.4e-49 200.7 200 58.5
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 1.4e-49 200.7 175 64.0
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 4.4e-48 195.7 215 54.0
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 2.2e-47 193.4 204 57.4
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 2.4e-46 189.9 208 52.4
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 3.1e-46 189.5 204 56.4
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 4.1e-46 189.1 228 50.4
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 7.0e-46 188.3 228 50.4
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 1.6e-45 187.2 265 47.2
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 1.0e-44 184.5 228 50.0
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 1.5e-43 180.6 228 49.6
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 1.5e-43 180.6 228 49.6
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 2.5e-43 179.9 241 49.4
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 4.7e-42 175.6 162 63.6
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 1.0e-41 174.5 221 49.8
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 2.3e-41 173.3 156 62.8
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 4.5e-37 159.1 119 68.9
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 2.9e-36 156.4 224 48.2
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 1.5e-35 154.1 200 47.5
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 1.4e-33 147.5 240 42.5
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 1.8e-33 147.1 207 48.8
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 7.5e-32 141.7 269 41.6
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 6.3e-31 138.7 131 61.1
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 1.1e-30 137.9 110 70.0
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 1.8e-30 137.1 265 41.9
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 1.8e-30 137.1 260 41.5
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 5.4e-30 135.6 269 40.9
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 5.4e-30 135.6 269 40.9
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 7.0e-30 135.2 260 41.9
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 5.9e-29 132.1 260 41.2
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 2.3e-28 130.2 260 41.5
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 2.3e-28 130.2 260 41.5
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 4.3e-27 125.9 229 44.1
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 1.2e-26 124.4 208 43.3
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 1.6e-26 124.0 92 68.5
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 4.7e-26 122.5 208 42.8
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 2.6e-16 90.1 222 35.1
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 8.3e-15 85.1 225 39.1
BcaC01g01540 Brassica carinata HOM05D000081 ORTHO05D014497 2.9e-07 60.1 48 60.4
BcaC01g01440 Brassica carinata HOM05D000081 ORTHO05D014497 4.9e-07 59.3 118 33.9
BolC3t21523H Brassica oleracea HOM05D000081 ORTHO05D014497 4.9e-07 59.3 118 33.9
BcaC01g01542 Brassica carinata HOM05D000081 ORTHO05D014497 1.9e-06 57.4 41 68.3
A08p00460 Brassica napus HOM05D000081 ORTHO05D014497 1.9e-06 57.4 53 58.5
C03p92930 Brassica napus HOM05D000081 ORTHO05D014497 4.1e-06 56.2 53 60.4
BolC3t21599H Brassica oleracea HOM05D000081 ORTHO05D014497 4.1e-06 56.2 122 34.4


User provided reference genes

Program Settings