Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 1.4e-105 386.3 198 100.0
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 3.4e-96 355.1 198 91.4
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 5.8e-96 354.4 198 90.9
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 1.7e-95 352.8 199 91.5
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 4.9e-95 351.3 193 91.7
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 1.5e-91 339.7 192 90.1
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 1.5e-91 339.7 198 89.9
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 8.4e-87 323.9 206 83.0
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 3.2e-86 322.0 206 82.0
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 6.0e-85 317.8 198 85.9
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 7.8e-85 317.4 206 81.6
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 1.1e-83 313.5 206 80.1
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 1.2e-80 303.5 206 78.6
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 4.9e-79 298.1 198 80.3
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 1.8e-73 279.6 178 80.9
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 3.4e-64 248.8 161 81.4
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 5.1e-52 208.4 201 59.7
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 8.7e-52 207.6 201 59.7
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 2.5e-51 206.1 210 56.2
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 3.3e-51 205.7 201 59.2
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 3.3e-51 205.7 201 59.2
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 3.2e-46 189.1 191 55.0
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 7.9e-45 184.5 200 54.5
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 6.7e-44 181.4 200 53.0
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 6.7e-44 181.4 200 53.0
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 3.4e-40 169.1 94 89.4
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 2.2e-39 166.4 98 82.7
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 6.7e-36 154.8 197 48.2
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 8.8e-36 154.5 210 46.7
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 8.8e-36 154.5 197 48.2
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 9.7e-35 151.0 197 48.2
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 8.2e-34 147.9 115 67.8
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 1.6e-32 143.7 197 46.2
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 2.0e-32 143.3 197 46.2
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 3.5e-32 142.5 201 47.3
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 1.3e-31 140.6 189 50.3
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 2.2e-31 139.8 108 66.7
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 2.0e-27 126.7 150 50.7
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 7.5e-27 124.8 190 42.6
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 7.5e-27 124.8 190 42.6
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 3.7e-26 122.5 190 43.7
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 4.8e-26 122.1 181 45.3
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 6.3e-26 121.7 187 43.9
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 1.1e-25 120.9 187 43.9
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 1.4e-25 120.6 187 44.4
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 5.3e-25 118.6 203 41.4
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 2.9e-23 112.8 182 44.5
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 5.2e-20 102.1 209 39.7
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 8.8e-20 101.3 201 35.8
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 8.8e-20 101.3 206 38.3
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 2.4e-17 93.2 192 35.4
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 9.1e-17 91.3 203 37.9
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 1.1e-14 84.3 207 37.2
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 1.1e-14 84.3 207 37.2
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 1.5e-14 84.0 207 36.2
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 1.5e-14 84.0 207 37.2
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 1.9e-14 83.6 207 36.2
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 8.0e-13 78.2 113 42.5
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 4.0e-12 75.9 92 51.1
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 5.7e-11 72.0 110 45.5
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 4.9e-10 68.9 209 33.0
BcaC01g01440 Brassica carinata HOM05D000081 ORTHO05D014497 1.3e-07 60.8 53 56.6
BolC3t21523H Brassica oleracea HOM05D000081 ORTHO05D014497 1.3e-07 60.8 53 56.6
BolC3t21599H Brassica oleracea HOM05D000081 ORTHO05D014497 5.6e-06 55.5 57 52.6


User provided reference genes

Program Settings