Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 6.3e-103 377.5 196 100.0
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 2.0e-96 355.9 196 95.9
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 5.0e-84 314.7 198 85.9
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 2.5e-83 312.4 198 84.8
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 4.3e-83 311.6 198 84.3
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 7.3e-83 310.8 199 84.9
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 2.3e-81 305.8 193 84.5
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 4.0e-81 305.1 206 81.1
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 3.4e-80 302.0 192 83.3
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 4.4e-80 301.6 206 80.1
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 2.9e-79 298.9 206 79.6
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 3.3e-75 285.4 206 76.7
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 5.2e-73 278.1 206 75.2
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 6.2e-66 254.6 178 78.1
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 4.0e-65 251.9 155 85.2
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 8.1e-58 227.6 160 77.5
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 1.2e-48 197.2 206 56.8
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 1.9e-46 189.9 204 56.9
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 9.3e-46 187.6 204 56.4
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 1.2e-45 187.2 204 56.4
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 1.2e-45 187.2 204 56.4
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 9.0e-41 171.0 98 86.7
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 2.9e-39 166.0 194 51.5
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 1.4e-38 163.7 203 50.7
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 3.2e-38 162.5 203 49.8
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 3.2e-38 162.5 203 49.8
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 4.2e-38 162.2 94 87.2
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 9.6e-35 151.0 202 50.0
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 1.3e-34 150.6 202 50.0
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 1.4e-33 147.1 202 50.0
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 5.3e-33 145.2 213 45.5
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 2.9e-31 139.4 202 47.5
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 3.8e-31 139.0 202 47.5
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 4.9e-31 138.7 115 64.3
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 2.7e-29 132.9 205 47.8
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 7.9e-29 131.3 191 49.7
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 1.0e-28 131.0 107 64.5
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 6.2e-26 121.7 107 61.7
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 1.5e-24 117.1 184 45.1
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 2.5e-22 109.8 185 43.8
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 4.2e-22 109.0 199 43.7
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 5.5e-22 108.6 192 42.7
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 5.5e-22 108.6 192 42.7
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 1.8e-20 103.6 192 42.7
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 5.1e-20 102.1 194 41.2
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 7.4e-19 98.2 173 42.2
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 3.7e-18 95.9 173 40.5
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 1.4e-17 94.0 182 40.7
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 6.9e-17 91.7 202 39.1
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 1.3e-15 87.4 202 39.1
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 3.8e-15 85.9 191 36.1
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 5.0e-15 85.5 184 40.2
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 5.0e-15 85.5 184 39.1
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 8.5e-15 84.7 184 39.7
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 8.5e-15 84.7 184 38.6
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 8.5e-15 84.7 184 39.7
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 1.9e-14 83.6 195 36.4
BcaC01g01440 Brassica carinata HOM05D000081 ORTHO05D014497 3.1e-09 66.2 53 60.4
BolC3t21523H Brassica oleracea HOM05D000081 ORTHO05D014497 3.1e-09 66.2 53 60.4
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 4.1e-09 65.9 114 38.6
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 3.4e-08 62.8 91 49.5
BolC3t21599H Brassica oleracea HOM05D000081 ORTHO05D014497 3.4e-08 62.8 45 64.4
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 7.7e-08 61.6 180 34.4
BraA08t32103Z Brassica rapa HOM05D000081 ORTHO05D014497 7.7e-08 61.6 73 47.9
BcaC01g01540 Brassica carinata HOM05D000081 ORTHO05D014497 1.0e-07 61.2 45 62.2
BcaC01g01542 Brassica carinata HOM05D000081 ORTHO05D014497 1.0e-07 61.2 45 62.2
C03p92940 Brassica napus HOM05D000081 ORTHO05D014497 1.0e-07 61.2 45 62.2
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 1.7e-07 60.5 109 41.3
A08p00460 Brassica napus HOM05D000081 ORTHO05D014497 5.0e-07 58.9 73 45.2
C03p92930 Brassica napus HOM05D000081 ORTHO05D014497 4.2e-06 55.8 88 43.2
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 5.5e-06 55.5 53 58.5


User provided reference genes

Program Settings