Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 3.6e-208 728.0 369 100.0
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 2.5e-201 705.3 368 96.7
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 4.3e-193 677.9 368 93.8
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 6.0e-187 657.5 369 92.7
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.2e-173 612.5 368 87.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 4.0e-143 511.9 368 75.3
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 9.8e-65 251.5 173 79.2
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 6.4e-64 248.8 184 74.5
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 6.4e-64 248.8 184 74.5
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.4e-63 247.7 173 78.6
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 9.2e-63 245.0 173 77.5
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.1e-60 238.0 169 76.9
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 2.4e-50 203.8 145 75.9
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 2.4e-47 193.7 103 97.1
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 3.5e-46 189.9 141 73.8
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 5.3e-34 149.4 160 58.1
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 2.0e-33 147.5 105 76.2
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 2.0e-33 147.5 105 76.2
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 4.3e-20 103.2 71 74.6
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 2.6e-17 94.0 117 50.4
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 3.4e-17 93.6 121 49.6
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 2.2e-16 90.9 117 49.6
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 3.8e-16 90.1 154 44.8
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 3.8e-16 90.1 154 44.8
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 6.5e-16 89.4 96 51.0
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 6.5e-16 89.4 96 51.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 6.5e-16 89.4 96 51.0
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.1e-15 88.6 99 48.5
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.9e-15 87.8 99 51.5
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.9e-15 87.8 138 47.1
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 9.3e-15 85.5 123 46.3
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 1.2e-14 85.1 99 51.5
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 1.6e-14 84.7 99 50.5
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 4.6e-14 83.2 164 39.0
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 6.1e-14 82.8 80 62.5
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 6.1e-14 82.8 158 39.9
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 7.9e-14 82.4 103 50.5
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 7.9e-14 82.4 99 50.5
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 1.3e-13 81.6 146 39.0
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.3e-13 81.6 103 50.5
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.8e-13 81.3 97 45.4
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 1.8e-13 81.3 138 44.9
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 3.0e-13 80.5 99 45.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 3.9e-13 80.1 99 45.5
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 1.5e-12 78.2 136 43.4
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 1.9e-12 77.8 79 60.8
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.9e-12 77.8 80 55.0
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.5e-12 77.4 99 46.5
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 4.3e-12 76.6 111 43.2
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 4.3e-12 76.6 151 37.7
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 5.7e-12 76.3 76 61.8
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.6e-11 74.7 87 52.9
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.6e-11 74.7 151 37.1
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 2.8e-11 73.9 92 51.1
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 2.8e-11 73.9 92 51.1
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 2.8e-11 73.9 92 51.1
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 8.2e-11 72.4 114 45.6
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 9.0e-10 68.9 69 56.5
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.5e-09 68.2 78 52.6
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 5.9e-09 66.2 74 54.1
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 2.5e-07 60.8 117 41.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.2e-07 60.5 109 45.9
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 7.2e-07 59.3 69 53.6
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 7.2e-07 59.3 69 53.6
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.6e-06 58.2 74 44.6
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 3.6e-06 57.0 111 41.4


User provided reference genes

Program Settings