Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p01280 Brassica napus HOM05D016977 ORTHO05D009812 1.3e-168 596.3 289 100.0
A08p01300 Brassica napus HOM05D000643 ORTHO05D011245 1.6e-22 110.9 68 86.8
BraA08t32180Z Brassica rapa HOM05D000643 ORTHO05D011245 1.6e-22 110.9 68 86.8
C03p91920 Brassica napus HOM05D000643 ORTHO05D011245 3.6e-22 109.8 68 85.3
BolC3t21510H Brassica oleracea HOM05D000643 ORTHO05D011245 3.6e-22 109.8 68 85.3
BcaB04g17034 Brassica carinata HOM05D000643 ORTHO05D011245 1.2e-17 94.7 68 75.0
BcaC08g44156 Brassica carinata HOM05D000643 ORTHO05D011245 7.8e-17 92.0 68 72.1
C06p15520 Brassica napus HOM05D000643 ORTHO05D011245 7.8e-17 92.0 68 72.1
Sp1g40460 Schrenkiella parvula HOM05D000643 ORTHO05D011245 7.8e-17 92.0 68 69.1
A05p17760 Brassica napus HOM05D000643 ORTHO05D011245 1.0e-16 91.7 68 72.1
BraA05t20668Z Brassica rapa HOM05D000643 ORTHO05D011245 1.0e-16 91.7 68 72.1
BcaB02g10872 Brassica carinata HOM05D000643 ORTHO05D011245 3.0e-16 90.1 68 67.6
A06p00630 Brassica napus HOM05D000643 ORTHO05D011245 6.6e-16 89.0 68 67.6
BraA06t23276Z Brassica rapa HOM05D000643 ORTHO05D011245 6.6e-16 89.0 68 67.6
Thhalv10011556m.g Eutrema salsugineum HOM05D000643 ORTHO05D011245 3.3e-15 86.7 68 69.1
BolC6t36744H Brassica oleracea HOM05D000643 ORTHO05D011245 1.6e-14 84.3 68 69.1
BcaC01g01428 Brassica carinata HOM05D000643 ORTHO05D011245 2.8e-14 83.6 68 70.6
AL1G62730 Arabidopsis lyrata HOM05D000643 ORTHO05D011245 3.6e-14 83.2 68 63.2
BcaC01g06525 Brassica carinata HOM05D016977 ORTHO05D039646 1.8e-13 80.9 47 78.7
Carub.0001s4327 Capsella rubella HOM05D000643 ORTHO05D011245 1.8e-13 80.9 68 60.3
CARHR044360 Cardamine hirsuta HOM05D000643 ORTHO05D011245 2.0e-12 77.4 68 60.3
BcaB07g33428 Brassica carinata HOM05D000643 ORTHO05D011245 3.8e-11 73.2 49 77.6
BcaC08g43576 Brassica carinata HOM05D000643 ORTHO05D011245 3.2e-10 70.1 68 58.8
C06p09770 Brassica napus HOM05D000643 ORTHO05D011245 3.2e-10 70.1 68 58.8
BolC6t36049H Brassica oleracea HOM05D000643 ORTHO05D011245 3.2e-10 70.1 68 58.8
C06p01020 Brassica napus HOM05D013239 ORTHO05D027781 5.4e-10 69.3 71 46.5
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 5.4e-10 69.3 71 46.5
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 5.4e-10 69.3 71 46.5
BraA09t37269Z Brassica rapa HOM05D013239 ORTHO05D027781 3.5e-09 66.6 68 45.6
BcaC08g45450 Brassica carinata HOM05D016977 ORTHO05D092559 2.3e-08 63.9 45 71.1
BolC7t43849H Brassica oleracea HOM05D013239 ORTHO05D027781 2.3e-08 63.9 54 53.7
BolC6t36445H Brassica oleracea HOM05D013239 ORTHO05D042748 6.6e-08 62.4 71 42.3
BcaB01g05553 Brassica carinata HOM05D012407 ORTHO05D015944 1.1e-07 61.6 37 81.1
BcaC09g50482 Brassica carinata HOM05D016977 ORTHO05D092072 1.5e-07 61.2 40 75.0
BcaC04g18614 Brassica carinata HOM05D016977 ORTHO05D093592 9.6e-07 58.5 40 72.5
BcaC03g14875 Brassica carinata HOM05D016977 ORTHO05D093734 2.1e-06 57.4 39 71.8


User provided reference genes

Program Settings