Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p01210 Brassica napus HOM05D006176 ORTHO05D007346 2.6e-62 241.9 125 100.0
BraA08t32172Z Brassica rapa HOM05D006176 ORTHO05D007346 2.6e-62 241.9 125 100.0
BcaB04g17025 Brassica carinata HOM05D006176 ORTHO05D007346 1.1e-60 236.5 125 96.8
BcaC01g01436 Brassica carinata HOM05D006176 ORTHO05D007346 9.4e-60 233.4 125 96.8
C03p92010 Brassica napus HOM05D006176 ORTHO05D007346 9.4e-60 233.4 125 96.8
BolC3t21519H Brassica oleracea HOM05D006176 ORTHO05D007346 9.4e-60 233.4 125 96.8
Sp1g40570 Schrenkiella parvula HOM05D006176 ORTHO05D007346 3.1e-55 218.4 125 89.6
Thhalv10011868m.g Eutrema salsugineum HOM05D006176 ORTHO05D007346 1.6e-54 216.1 125 88.0
Carub.0001s4336 Capsella rubella HOM05D006176 ORTHO05D007346 2.0e-54 215.7 125 87.2
CARHR044470 Cardamine hirsuta HOM05D006176 ORTHO05D007346 6.5e-53 210.7 125 85.6
AL1G62840 Arabidopsis lyrata HOM05D006176 ORTHO05D007346 4.2e-52 208.0 127 85.0
BraA06t23268Z Brassica rapa HOM05D006176 ORTHO05D007346 1.2e-51 206.5 125 83.2
AT1G54120 Arabidopsis thaliana HOM05D006176 ORTHO05D007346 4.7e-51 204.5 125 84.8
A06p00540 Brassica napus HOM05D006176 ORTHO05D007346 4.7e-51 204.5 125 82.4
BcaC08g43592 Brassica carinata HOM05D006176 ORTHO05D007346 5.2e-50 201.1 125 80.8
C06p09900 Brassica napus HOM05D006176 ORTHO05D007346 5.2e-50 201.1 125 80.8
BolC6t36062H Brassica oleracea HOM05D006176 ORTHO05D007346 5.2e-50 201.1 125 80.8
BcaB07g33263 Brassica carinata HOM05D006176 ORTHO05D007346 1.2e-49 199.9 125 80.0
C06p15630 Brassica napus HOM05D006176 ORTHO05D007346 1.5e-44 183.0 123 80.5
BcaB02g10861 Brassica carinata HOM05D006176 ORTHO05D007346 3.2e-44 181.8 123 76.4
Aa31LG10G1290 Aethionema arabicum HOM05D006176 ORTHO05D007346 7.5e-41 170.6 117 72.6
Aa31LG8G1260 Aethionema arabicum HOM05D006176 ORTHO05D007346 1.2e-33 146.7 119 61.3
Carub.0003s1365 Capsella rubella HOM05D006176 ORTHO05D007346 1.2e-33 146.7 128 61.7
BolC6t36752H Brassica oleracea HOM05D006176 ORTHO05D007346 9.8e-33 143.7 99 78.8
Sp3g12300 Schrenkiella parvula HOM05D006176 ORTHO05D007346 2.2e-32 142.5 119 63.9
Thhalv10021772m.g Eutrema salsugineum HOM05D006176 ORTHO05D007346 2.8e-32 142.1 128 60.9
THA.LOC104810370 Tarenaya hassleriana HOM05D006176 ORTHO05D007346 2.8e-32 142.1 115 66.1
CARHR088900 Cardamine hirsuta HOM05D006176 ORTHO05D007346 6.3e-32 141.0 119 63.9
THA.LOC104822658 Tarenaya hassleriana HOM05D006176 ORTHO05D007346 1.4e-31 139.8 111 65.8
AT3G14060 Arabidopsis thaliana HOM05D006176 ORTHO05D007346 1.8e-31 139.4 129 62.0
BcaC08g44161 Brassica carinata HOM05D006176 ORTHO05D007346 3.1e-31 138.7 123 64.2
AL3G26260 Arabidopsis lyrata HOM05D006176 ORTHO05D007346 7.0e-31 137.5 129 62.0
A01p39590 Brassica napus HOM05D006176 ORTHO05D007346 1.7e-29 132.9 125 60.8
BraA01t03999Z Brassica rapa HOM05D006176 ORTHO05D007346 1.7e-29 132.9 125 60.8
C01p50530 Brassica napus HOM05D006176 ORTHO05D007346 2.5e-28 129.0 125 58.4
BolC1t05004H Brassica oleracea HOM05D006176 ORTHO05D007346 3.3e-28 128.6 125 58.4
BcaNung04891 Brassica carinata HOM05D006176 ORTHO05D007346 1.2e-27 126.7 125 57.6
Nitab4.5_0010678g0020 Nicotiana tabacum HOM05D006176 ORTHO05D007346 4.0e-18 95.1 109 45.9
Manes.04G145900 Manihot esculenta HOM05D006176 ORTHO05D007346 5.8e-17 91.3 118 44.1
Nitab4.5_0000255g0320 Nicotiana tabacum HOM05D006176 ORTHO05D007346 2.9e-16 89.0 109 43.1
Atru.chr1.4021 Acer truncatum HOM05D006176 ORTHO05D007346 6.4e-16 87.8 108 46.3
Atru.chr1.4004 Acer truncatum HOM05D006176 ORTHO05D007346 2.4e-15 85.9 108 45.4
Sopen06g022380 Solanum pennellii HOM05D006176 ORTHO05D007346 7.0e-15 84.3 111 40.5
PGSC0003DMG400004890 Solanum tuberosum HOM05D006176 ORTHO05D007346 2.7e-14 82.4 110 41.8
Cfa003523 Carpinus fangiana HOM05D006176 ORTHO05D007346 3.5e-14 82.0 110 44.5
Duzib192G0929 Durio zibethinus HOM05D006176 ORTHO05D007346 1.0e-13 80.5 99 45.5
Glyma.16G008800 Glycine max HOM05D006176 ORTHO05D007346 3.0e-13 79.0 114 44.7
Thecc.06G122200 Theobroma cacao HOM05D006176 ORTHO05D007346 3.0e-13 79.0 120 38.3
COL.COLO4_30741 Corchorus olitorius HOM05D006176 ORTHO05D007346 5.1e-13 78.2 106 43.4
Cpa.g.c40357 Carica papaya HOM05D006176 ORTHO05D007346 6.6e-13 77.8 104 40.4
Glyma.07G040000 Glycine max HOM05D006176 ORTHO05D007346 8.6e-13 77.4 109 43.1
BcaNung06452 Brassica carinata HOM05D006176 ORTHO05D007346 1.1e-12 77.0 73 58.9
Nn8g38624 Nelumbo nucifera HOM05D006176 ORTHO05D007346 1.5e-12 76.6 105 39.0
TWI75G0921 Tripterygium wilfordii HOM05D006176 ORTHO05D007346 1.5e-12 76.6 111 40.5
Migut.I01087 Erythranthe guttata HOM05D006176 ORTHO05D007346 1.9e-12 76.3 106 42.5
Haze_16045 Corylus avellana HOM05D006176 ORTHO05D007346 3.3e-12 75.5 97 44.3
CiPaw.01G217500 Carya illinoinensis HOM05D006176 ORTHO05D007346 5.6e-12 74.7 106 43.4
Oeu043644.1 Olea europaea HOM05D006176 ORTHO05D007346 5.6e-12 74.7 109 43.1
Peaxi162Scf00038g02015 Petunia axillaris HOM05D006176 ORTHO05D007346 5.6e-12 74.7 100 43.0
Phvul.010G128700 Phaseolus vulgaris HOM05D006176 ORTHO05D007346 5.6e-12 74.7 114 43.0
Sc12g0010640 Simmondsia chinensis HOM05D006176 ORTHO05D007346 5.6e-12 74.7 113 38.9
Solyc06g062930.1 Solanum lycopersicum HOM05D006176 ORTHO05D007346 5.6e-12 74.7 111 38.7
Potri.001G167600 Populus trichocarpa HOM05D006176 ORTHO05D007346 7.3e-12 74.3 122 36.9
Potri.003G067200 Populus trichocarpa HOM05D006176 ORTHO05D007346 7.3e-12 74.3 121 37.2
Actinidia26022 Actinidia chinensis HOM05D006176 ORTHO05D007346 9.5e-12 73.9 119 39.5
Aqoxy2G03952 Aquilegia oxysepala HOM05D006176 ORTHO05D007346 1.6e-11 73.2 94 40.4
Gohir.A05G139800 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.6e-11 73.2 113 38.9
Gohir.A10G054700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.6e-11 73.2 129 37.2
Gohir.D05G142000 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.6e-11 73.2 118 38.1
Gohir.D10G056700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.6e-11 73.2 129 37.2
Gorai.009G146100 Gossypium raimondii HOM05D006176 ORTHO05D007346 1.6e-11 73.2 118 38.1
MBI19_g09833_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 4.7e-11 71.6 119 34.5
Ca_23393_v3 Cicer arietinum L. HOM05D006176 ORTHO05D007346 6.2e-11 71.2 100 42.0
Gorai.011G060500 Gossypium raimondii HOM05D006176 ORTHO05D007346 8.1e-11 70.9 129 36.4
Medtr8g021025 Medicago truncatula HOM05D006176 ORTHO05D007346 8.1e-11 70.9 110 39.1
Sed0000884 Sechium edule HOM05D006176 ORTHO05D007346 1.4e-10 70.1 107 38.3
RcHm_v2.0_Chr2g0146001 Rosa chinensis HOM05D006176 ORTHO05D007346 1.8e-10 69.7 112 40.2
SGA_v2.0_scaffold122G33347 Striga asiatica HOM05D006176 ORTHO05D007346 3.1e-10 68.9 110 40.9
MBI13_g35417_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 8.9e-10 67.4 98 35.7
MD09G1180800 Malus domestica HOM05D006176 ORTHO05D007346 8.9e-10 67.4 105 40.0
PGR102G2654 Punica granatum HOM05D006176 ORTHO05D007346 8.9e-10 67.4 97 40.2
TAR624G0214 Trochodendron aralioides HOM05D006176 ORTHO05D007346 8.9e-10 67.4 102 41.2
vmacro22033 Vaccinium macrocarpon HOM05D006176 ORTHO05D007346 8.9e-10 67.4 108 34.3
FAN09G3283 Fragaria x ananassa HOM05D006176 ORTHO05D007346 1.2e-09 67.0 112 38.4
Dinv37860 Davidia involucrata HOM05D006176 ORTHO05D007346 1.5e-09 66.6 108 38.0
MD17G1166900 Malus domestica HOM05D006176 ORTHO05D007346 1.5e-09 66.6 105 39.0
Ah.08g216920 Amaranthus hybridus HOM05D006176 ORTHO05D007346 2.0e-09 66.2 112 33.9
Lalb_Chr04g0263581 Lupinus albus HOM05D006176 ORTHO05D007346 2.6e-09 65.9 103 40.8
FvH4_6g34980 Fragaria vesca HOM05D006176 ORTHO05D007346 3.4e-09 65.5 112 38.4
FAN05G0172 Fragaria x ananassa HOM05D006176 ORTHO05D007346 3.4e-09 65.5 109 37.6
FAN14G1476 Fragaria x ananassa HOM05D006176 ORTHO05D007346 3.4e-09 65.5 112 38.4
Dinv20423 Davidia involucrata HOM05D006176 ORTHO05D007346 5.8e-09 64.7 110 39.1
TPR.G16753 Trifolium pratense HOM05D006176 ORTHO05D007346 5.8e-09 64.7 97 40.2
PSO421G0391 Papaver somniferum HOM05D006176 ORTHO05D007346 7.5e-09 64.3 108 35.2
Lalb_Chr04g0261121 Lupinus albus HOM05D006176 ORTHO05D007346 2.9e-08 62.4 107 35.5
Oeu000400.1 Olea europaea HOM05D006176 ORTHO05D007346 2.9e-08 62.4 96 41.7
Sabra03G0039100 Salix brachista HOM05D006176 ORTHO05D007346 2.9e-08 62.4 100 37.0
Lj3g0022886 Lotus japonicus HOM05D006176 ORTHO05D007346 3.7e-08 62.0 107 39.3
EL10Ac7g16423 Beta vulgaris HOM05D006176 ORTHO05D007346 4.9e-08 61.6 112 33.9
Migut.D00934 Erythranthe guttata HOM05D006176 ORTHO05D007346 4.9e-08 61.6 108 38.9
CANSAT56G3952 Cannabis sativa HOM05D006176 ORTHO05D007346 8.3e-08 60.8 92 39.1
Rhsim12G0210400 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.4e-07 60.1 107 34.6
Rhsim12G0210800 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.4e-07 60.1 107 34.6
Lsat_1_v5_gn_4_94161 Lactuca sativa HOM05D006176 ORTHO05D007346 2.4e-07 59.3 110 32.7
Lalb_Chr14g0361931 Lupinus albus HOM05D006176 ORTHO05D007346 2.4e-07 59.3 99 39.4
ClCG07G014560 Citrullus lanatus HOM05D006176 ORTHO05D007346 3.2e-07 58.9 106 37.7
Prupe.3G039100 Prunus persica HOM05D006176 ORTHO05D007346 3.2e-07 58.9 107 37.4
PSO063G0286 Papaver somniferum HOM05D006176 ORTHO05D007346 9.2e-07 57.4 99 36.4
MELO3C022667.2 Cucumis melo HOM05D006176 ORTHO05D007346 1.6e-06 56.6 97 37.1
CsaV3_3G030710 Cucumis sativus L. HOM05D006176 ORTHO05D007346 2.1e-06 56.2 97 37.1
DCAR_022691 Daucus carota HOM05D006176 ORTHO05D007346 2.1e-06 56.2 99 36.4
Sopen03g041090 Solanum pennellii HOM05D006176 ORTHO05D007346 2.1e-06 56.2 112 35.7
Nitab4.5_0000189g0110 Nicotiana tabacum HOM05D006176 ORTHO05D007346 3.5e-06 55.5 92 39.1
SGA_v2.0_scaffold4G02067 Striga asiatica HOM05D006176 ORTHO05D007346 3.5e-06 55.5 91 37.4
PGSC0003DMG400022907 Solanum tuberosum HOM05D006176 ORTHO05D007346 6.0e-06 54.7 111 35.1
Ciclev10027265m.g Citrus clementina HOM05D006176 ORTHO05D007346 7.8e-06 54.3 76 40.8


User provided reference genes

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