Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p00990 Brassica napus HOM05D000179 ORTHO05D024114 4.6e-69 264.6 151 100.0
BcaC01g01458 Brassica carinata HOM05D000179 ORTHO05D024114 9.0e-57 223.8 141 83.7
C03p92240 Brassica napus HOM05D000179 ORTHO05D024114 9.0e-57 223.8 141 83.7
BraA08t32152Z Brassica rapa HOM05D000179 ORTHO05D024114 9.0e-57 223.8 172 71.5
A08p00950 Brassica napus HOM05D000179 ORTHO05D000107 1.8e-49 199.5 174 64.4
BolC3t21540H Brassica oleracea HOM05D000179 ORTHO05D000107 1.8e-49 199.5 174 64.4
BraA08t32150Z Brassica rapa HOM05D000179 ORTHO05D000107 1.8e-49 199.5 174 64.4
C03p92260 Brassica napus HOM05D000179 ORTHO05D000107 4.5e-48 194.9 174 64.4
BcaC01g01465 Brassica carinata HOM05D000179 ORTHO05D000107 7.6e-48 194.1 174 63.2
AL1G63110 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 2.9e-39 165.6 177 55.9
AT1G55110 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 4.2e-38 161.8 177 63.3
BcaB02g10846 Brassica carinata HOM05D000179 ORTHO05D000107 4.6e-37 158.3 181 53.6
Sp1g40770 Schrenkiella parvula HOM05D000179 ORTHO05D000107 3.3e-35 152.1 187 52.9
CARHR044700 Cardamine hirsuta HOM05D000179 ORTHO05D000107 3.7e-34 148.7 179 56.4
BcaB04g16992 Brassica carinata HOM05D000179 ORTHO05D000107 3.2e-30 135.6 181 48.1
Thhalv10011450m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 5.5e-30 134.8 179 57.5
BcaC01g01462 Brassica carinata HOM05D000179 ORTHO05D024114 2.0e-27 126.3 66 95.5
BcaC01g01461 Brassica carinata HOM05D000179 ORTHO05D000107 8.8e-20 100.9 60 85.0
Carub.0003s1336 Capsella rubella HOM05D000179 ORTHO05D000107 2.0e-16 89.7 201 40.3
A05p35570 Brassica napus HOM05D000179 ORTHO05D000107 1.6e-13 80.1 192 36.5
AL3G25950 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 3.0e-12 75.9 201 36.8
THA.LOC104810341 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 4.0e-12 75.5 167 40.1
Sp3g12040 Schrenkiella parvula HOM05D000179 ORTHO05D000107 8.8e-12 74.3 215 36.7
CARHR088580 Cardamine hirsuta HOM05D000179 ORTHO05D000107 1.2e-11 73.9 198 36.9
AT3G13810 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 2.0e-11 73.2 193 36.8
BraA05t22366Z Brassica rapa HOM05D000179 ORTHO05D000107 2.6e-11 72.8 192 35.4
BcaC05g29154 Brassica carinata HOM05D000179 ORTHO05D000107 3.7e-10 68.9 191 35.1
BcaC09g48374 Brassica carinata HOM05D000179 ORTHO05D000107 3.7e-10 68.9 197 37.1
C01p50790 Brassica napus HOM05D000179 ORTHO05D000107 3.7e-10 68.9 197 37.1
C05p53960 Brassica napus HOM05D000179 ORTHO05D000107 3.7e-10 68.9 191 35.1
BolC1t05027H Brassica oleracea HOM05D000179 ORTHO05D000107 3.7e-10 68.9 197 37.1
BolC5t34062H Brassica oleracea HOM05D000179 ORTHO05D000107 3.7e-10 68.9 191 35.1
Thhalv10020544m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 1.4e-09 67.0 190 36.3
BcaB04g18800 Brassica carinata HOM05D000179 ORTHO05D000107 2.4e-09 66.2 201 34.3
BcaC01g03973 Brassica carinata HOM05D000179 ORTHO05D000107 2.4e-09 66.2 186 39.2
BolC3t16924H Brassica oleracea HOM05D000179 ORTHO05D000007 2.4e-09 66.2 186 39.2
C03p46610 Brassica napus HOM05D000179 ORTHO05D000107 1.2e-08 63.9 186 38.7
Carub.0001s4361 Capsella rubella HOM05D000179 ORTHO05D000107 1.6e-08 63.5 36 80.6
Aa31LG10G890 Aethionema arabicum HOM05D000179 ORTHO05D000107 2.7e-08 62.8 186 33.3
BcaB04g20977 Brassica carinata HOM05D000179 ORTHO05D000107 2.7e-08 62.8 194 34.5
BraA01t04018Z Brassica rapa HOM05D000179 ORTHO05D000107 3.2e-06 55.8 199 33.2


User provided reference genes

Program Settings