Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 3.7e-198 694.9 410 100.0
BcaC01g01477 Brassica carinata HOM05D003795 ORTHO05D004308 1.2e-156 557.0 423 85.1
C03p92420 Brassica napus HOM05D003795 ORTHO05D004308 1.2e-156 557.0 423 85.1
BolC3t21550H Brassica oleracea HOM05D003795 ORTHO05D004308 4.0e-152 542.0 418 84.7
BraA08t32141Z Brassica rapa HOM05D003795 ORTHO05D004308 1.2e-148 530.4 413 84.3
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 4.9e-105 385.6 511 61.8
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.5e-98 364.0 505 57.6
BcaB04g16989 Brassica carinata HOM05D003795 ORTHO05D004308 4.9e-89 332.4 486 59.1
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 3.6e-84 316.2 482 49.6
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.9e-77 293.9 486 52.5
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.1e-75 288.1 481 53.4
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 1.3e-62 244.6 529 44.2
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 5.5e-48 196.1 547 37.1
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 1.2e-47 194.9 590 36.3
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 6.7e-46 189.1 568 38.6
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 8.1e-44 182.2 560 38.2
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 6.9e-43 179.1 573 35.6
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.1e-40 171.8 577 37.4
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 1.4e-40 171.4 470 40.2
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 3.5e-39 166.8 539 33.4
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 3.5e-39 166.8 443 37.0
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 6.0e-39 166.0 535 40.7
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 3.7e-36 156.8 544 36.4
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 6.9e-35 152.5 504 35.1
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 1.2e-34 151.8 455 32.3
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 2.0e-34 151.0 551 35.4
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 5.9e-34 149.4 552 35.1
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 5.9e-34 149.4 519 34.3
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 1.0e-33 148.7 537 31.8
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 2.9e-33 147.1 500 36.4
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 3.8e-33 146.7 462 32.0
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 2.5e-32 144.1 487 34.7
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 4.2e-32 143.3 461 37.7
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 3.5e-31 140.2 469 33.0
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 4.6e-31 139.8 509 34.8
Lalb_Chr18g0053951 Lupinus albus HOM05D003795 ORTHO05D004308 6.1e-31 139.4 470 32.3
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 6.1e-31 139.4 484 35.1
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 1.8e-30 137.9 516 33.5
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.3e-30 137.5 587 34.9
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 2.3e-30 137.5 487 35.7
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 3.0e-30 137.1 487 34.7
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 3.9e-30 136.7 507 33.7
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 5.1e-30 136.3 502 33.3
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 1.9e-29 134.4 559 31.3
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 1.9e-29 134.4 523 32.1
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 1.9e-29 134.4 527 33.8
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 4.3e-29 133.3 521 31.7
A04p10490 Brassica napus HOM05D003795 ORTHO05D004308 5.7e-29 132.9 543 36.8
BcaB07g34060 Brassica carinata HOM05D003795 ORTHO05D004308 9.7e-29 132.1 87 82.8
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 1.3e-28 131.7 624 33.0
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 3.7e-28 130.2 494 34.6
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 3.7e-28 130.2 522 32.4
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 4.8e-28 129.8 531 31.5
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 8.2e-28 129.0 529 32.5
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 1.1e-27 128.6 501 30.5
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 1.1e-27 128.6 525 33.9
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 2.4e-27 127.5 525 31.2
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 3.1e-27 127.1 443 36.3
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 5.3e-27 126.3 498 33.7
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 9.0e-27 125.6 517 33.5
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 1.2e-26 125.2 436 36.0
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 1.2e-26 125.2 445 33.7
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 1.5e-26 124.8 524 34.4
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 2.0e-26 124.4 532 31.8
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 2.6e-26 124.0 558 31.7
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 3.4e-26 123.6 493 31.6
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 3.4e-26 123.6 558 30.8
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 4.5e-26 123.2 492 31.5
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 5.9e-26 122.9 479 34.2
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 7.7e-26 122.5 499 31.7
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 7.7e-26 122.5 499 32.1
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 7.7e-26 122.5 499 32.1
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 7.7e-26 122.5 499 33.3
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 1.7e-25 121.3 539 31.0
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 1.7e-25 121.3 503 33.2
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 1.7e-25 121.3 469 33.3
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 1.7e-25 121.3 463 32.2
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 1.7e-25 121.3 443 32.3
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 2.2e-25 120.9 499 31.1
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 2.9e-25 120.6 558 32.8
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 5.0e-25 119.8 495 33.1
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 8.5e-25 119.0 463 30.7
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 5.5e-24 116.3 508 31.9
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 9.4e-24 115.5 519 29.5
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 9.4e-24 115.5 559 29.3
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 1.2e-23 115.2 391 34.8
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 1.6e-23 114.8 482 33.2
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 3.6e-23 113.6 553 30.9
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 6.1e-23 112.8 503 30.0
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 1.8e-22 111.3 483 33.5
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 2.3e-22 110.9 494 32.2
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 3.0e-22 110.5 482 31.7
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 3.0e-22 110.5 464 34.1
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 3.9e-22 110.2 471 33.5
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 3.9e-22 110.2 502 32.9
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 8.8e-22 109.0 485 30.5
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 1.1e-21 108.6 519 29.5
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 2.0e-21 107.8 483 34.4
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 2.0e-21 107.8 431 33.4
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 2.5e-21 107.5 514 28.6
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 4.3e-21 106.7 484 28.1
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 7.4e-21 105.9 486 31.7
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 9.7e-21 105.5 554 30.1
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 9.7e-21 105.5 511 31.5
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.3e-20 105.1 542 28.6
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 2.2e-20 104.4 511 32.1
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 2.8e-20 104.0 630 28.9
AL6G17260 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 4.8e-20 103.2 133 48.1
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 1.4e-19 101.7 494 33.4
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 1.4e-19 101.7 454 30.6
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 1.4e-19 101.7 468 29.9
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 1.8e-19 101.3 553 28.9
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.8e-19 101.3 553 28.2
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 4.1e-19 100.1 506 29.8
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 9.1e-19 99.0 535 31.4
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 3.4e-18 97.1 504 30.2
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 4.5e-18 96.7 519 31.8
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 5.9e-18 96.3 537 27.7
PGSC0003DMG402019715 Solanum tuberosum HOM05D003795 ORTHO05D004308 2.9e-17 94.0 163 40.5
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 3.8e-17 93.6 508 29.5
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 1.1e-16 92.0 166 42.2
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.1e-16 92.0 444 30.6
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 1.1e-16 92.0 444 30.9
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 1.4e-16 91.7 338 35.8
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 7.2e-16 89.4 513 30.2
EL10Ac4g08850 Beta vulgaris HOM05D003795 ORTHO05D004308 9.4e-16 89.0 173 40.5
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 2.7e-15 87.4 568 29.8
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 3.6e-15 87.0 410 31.5
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 4.7e-15 86.7 443 28.2
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 6.1e-15 86.3 425 28.9
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 2.3e-14 84.3 483 28.4
Aqoxy2G03712 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 3.0e-14 84.0 181 37.0
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 3.0e-14 84.0 566 26.5
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 3.9e-14 83.6 509 29.5
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 2.0e-13 81.3 294 30.3
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 1.3e-12 78.6 88 52.3
BcaB05g23170 Brassica carinata HOM05D003795 ORTHO05D004308 1.7e-12 78.2 82 57.3
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 3.7e-12 77.0 568 27.5
HanXRQChr09g0258951 Helianthus annuus HOM05D003795 ORTHO05D004308 6.3e-12 76.3 187 33.2
Lsat_1_v5_gn_8_114961 Lactuca sativa HOM05D003795 ORTHO05D004308 1.1e-11 75.5 394 30.2
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 2.4e-11 74.3 196 33.7
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 5.3e-11 73.2 572 25.3
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.6e-10 71.6 381 29.9
ECA232G0457 Erigeron canadensis HOM05D003795 ORTHO05D004308 2.0e-10 71.2 312 32.4
VMungo1383G0923 Vigna mungo HOM05D003795 ORTHO05D004308 4.5e-10 70.1 88 51.1
Prupe.7G058700 Prunus persica HOM05D003795 ORTHO05D004308 5.9e-10 69.7 43 76.7
MD12G1074700 Malus domestica HOM05D003795 ORTHO05D004308 6.5e-09 66.2 433 29.8
BraA05t20886Z Brassica rapa HOM05D003089 ORTHO05D001766 1.1e-08 65.5 172 46.5
CDE08G0767 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 2.5e-08 64.3 153 35.9
Lalb_Chr10g0103891 Lupinus albus HOM05D003795 ORTHO05D004308 5.5e-08 63.2 61 62.3
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 6.1e-07 59.7 555 25.2
VMungo1215G2457 Vigna mungo HOM05D003795 ORTHO05D004308 6.1e-07 59.7 199 33.2
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 8.0e-07 59.3 201 32.8
AUR62010626 Chenopodium quinoa HOM05D003795 ORTHO05D004308 1.0e-06 58.9 102 42.2
Os02g0638200 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 1.0e-06 58.9 121 35.5
Dinv19094 Davidia involucrata HOM05D003795 ORTHO05D004308 1.4e-06 58.5 189 35.4
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 2.3e-06 57.8 387 29.5
AUR62017269 Chenopodium quinoa HOM05D003795 ORTHO05D004308 2.3e-06 57.8 369 28.5
BcaB05g24123 Brassica carinata HOM05D003795 ORTHO05D004308 3.0e-06 57.4 208 33.7


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