Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p00710 Brassica napus HOM05D004778 ORTHO05D005679 8.5e-19 96.3 59 100.0
BraA08t32128Z Brassica rapa HOM05D004778 ORTHO05D005679 8.5e-19 96.3 59 100.0
BcaB04g16964 Brassica carinata HOM05D004778 ORTHO05D005679 7.2e-18 93.2 59 96.6
BcaC01g01515 Brassica carinata HOM05D004778 ORTHO05D005679 7.2e-18 93.2 59 96.6
BcaC08g43615 Brassica carinata HOM05D004778 ORTHO05D005679 7.2e-18 93.2 58 96.6
C03p92630 Brassica napus HOM05D004778 ORTHO05D005679 7.2e-18 93.2 59 96.6
C06p10290 Brassica napus HOM05D004778 ORTHO05D005679 7.2e-18 93.2 58 96.6
BolC3t21577H Brassica oleracea HOM05D004778 ORTHO05D005679 7.2e-18 93.2 59 96.6
BolC6t36104H Brassica oleracea HOM05D004778 ORTHO05D005679 9.4e-18 92.8 58 94.8
Sp1g41010 Schrenkiella parvula HOM05D004778 ORTHO05D005679 1.2e-17 92.4 58 96.6
A05p17520 Brassica napus HOM05D004778 ORTHO05D005679 2.1e-17 91.7 58 94.8
BraA05t20646Z Brassica rapa HOM05D004778 ORTHO05D005679 2.1e-17 91.7 58 94.8
A06p00250 Brassica napus HOM05D004778 ORTHO05D005679 3.6e-17 90.9 58 94.8
BraA06t23241Z Brassica rapa HOM05D004778 ORTHO05D005679 3.6e-17 90.9 58 94.8
BcaC08g44193 Brassica carinata HOM05D004778 ORTHO05D005679 1.0e-16 89.4 58 93.1
BolC6t36791H Brassica oleracea HOM05D004778 ORTHO05D005679 1.0e-16 89.4 58 93.1
CARHR088190 Cardamine hirsuta HOM05D004778 ORTHO05D005679 2.4e-13 78.2 59 83.1
BcaNung06233 Brassica carinata HOM05D004778 ORTHO05D005679 6.9e-13 76.6 59 79.7
BolC5t34103H Brassica oleracea HOM05D004778 ORTHO05D005679 6.9e-13 76.6 59 79.7
BraA05t22399Z Brassica rapa HOM05D004778 ORTHO05D005679 2.0e-12 75.1 59 78.0
AT3G13520 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 6.5e-11 70.1 59 78.0
BcaB05g23546 Brassica carinata HOM05D004778 ORTHO05D005679 3.2e-10 67.8 59 71.2
Aa31LG8G720 Aethionema arabicum HOM05D004778 ORTHO05D005679 4.2e-10 67.4 60 76.7
AL3G25430 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 4.2e-10 67.4 59 76.3
BcaB04g20986 Brassica carinata HOM05D004778 ORTHO05D005679 4.2e-10 67.4 60 75.0
C01p51570 Brassica napus HOM05D004778 ORTHO05D005679 4.2e-10 67.4 60 75.0
BolC1t05100H Brassica oleracea HOM05D004778 ORTHO05D005679 4.2e-10 67.4 60 75.0
BraA01t04050Z Brassica rapa HOM05D004778 ORTHO05D005679 7.2e-10 66.6 60 73.3
Carub.0003s1299 Capsella rubella HOM05D004778 ORTHO05D005679 1.0e-08 62.8 60 75.0
CARHR270190 Cardamine hirsuta HOM05D004778 ORTHO05D005679 2.0e-07 58.5 59 66.1
Sp6g18330 Schrenkiella parvula HOM05D004778 ORTHO05D005679 3.3e-07 57.8 59 64.4
A02p09020 Brassica napus HOM05D004778 ORTHO05D005679 4.4e-07 57.4 59 62.7
BraA02t05971Z Brassica rapa HOM05D004778 ORTHO05D005679 4.4e-07 57.4 59 62.7
BcaC03g14215 Brassica carinata HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 61.0
BcaC04g20076 Brassica carinata HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 62.7
C02p15150 Brassica napus HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 61.0
C09p48130 Brassica napus HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 62.7
BolC2t07632H Brassica oleracea HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 61.0
BolC9t57665H Brassica oleracea HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 62.7
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 7.4e-07 56.6 59 66.1
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 9.7e-07 56.2 59 62.7
A10p13910 Brassica napus HOM05D004778 ORTHO05D005679 1.3e-06 55.8 59 61.0
C05p54350 Brassica napus HOM05D004778 ORTHO05D005679 1.3e-06 55.8 44 75.0
BraA10t43484Z Brassica rapa HOM05D004778 ORTHO05D005679 1.3e-06 55.8 59 61.0
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 1.7e-06 55.5 59 62.7
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 2.2e-06 55.1 59 62.7
A05p35930 Brassica napus HOM05D004778 ORTHO05D005679 3.7e-06 54.3 44 72.7
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 3.7e-06 54.3 59 64.4
AL8G32300 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 6.3e-06 53.5 59 59.3
AT5G56540 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 6.3e-06 53.5 59 59.3
Sp3g11730 Schrenkiella parvula HOM05D004778 ORTHO05D005679 8.2e-06 53.1 59 66.1


User provided reference genes

Program Settings