Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p43080 Brassica napus HOM05D009405 ORTHO05D011711 4.7e-58 227.6 114 100.0
A09p41400 Brassica napus HOM05D014165 ORTHO05D016792 4.7e-58 227.6 114 100.0
A05p35590 Brassica napus HOM05D009405 ORTHO05D011711 3.2e-46 188.3 113 82.3
C09p33570 Brassica napus HOM05D009405 ORTHO05D011711 1.1e-43 179.9 113 77.9
BraA09t37462Z Brassica rapa HOM05D009405 ORTHO05D011711 7.3e-43 177.2 127 74.0
C09p62570 Brassica napus HOM05D009405 ORTHO05D011711 1.3e-39 166.4 105 80.0
BolC5t31340H Brassica oleracea HOM05D009405 ORTHO05D011711 3.3e-35 151.8 97 75.3
C07p07070 Brassica napus HOM05D009405 ORTHO05D011711 9.2e-30 133.7 87 71.3
A04p10550 Brassica napus HOM05D009405 ORTHO05D011711 1.6e-21 106.3 110 50.0
C06p14120 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-20 103.2 59 81.4
BolC6t36590H Brassica oleracea HOM05D000096 ORTHO05D000045 1.3e-20 103.2 59 81.4
BolC4t23236H Brassica oleracea HOM05D010193 ORTHO05D012632 3.3e-19 98.6 108 47.2
BraA02t08976Z Brassica rapa HOM05D010193 ORTHO05D012632 7.3e-19 97.4 103 46.6
BcaB07g31690 Brassica carinata HOM05D000305 ORTHO05D000065 9.6e-19 97.1 108 43.5
BcaC06g34455 Brassica carinata HOM05D010193 ORTHO05D012632 1.6e-18 96.3 108 46.3
A03p65880 Brassica napus HOM05D009405 ORTHO05D011711 1.6e-18 96.3 96 50.0
A09p36280 Brassica napus HOM05D010193 ORTHO05D012632 1.8e-17 92.8 110 45.5
BraA03t15375Z Brassica rapa HOM05D010193 ORTHO05D012632 1.8e-17 92.8 108 45.4
A04p07620 Brassica napus HOM05D010193 ORTHO05D012632 9.0e-17 90.5 110 44.5
BraA04t16453Z Brassica rapa HOM05D010193 ORTHO05D012632 2.6e-16 89.0 110 43.6
C04p37730 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-16 88.6 110 43.6
C07p51450 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-16 88.6 105 45.7
BcaNung01610 Brassica carinata HOM05D000305 ORTHO05D000065 9.9e-16 87.0 108 43.5
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 2.2e-15 85.9 102 38.2
Sp4g05650 Schrenkiella parvula HOM05D000305 ORTHO05D000065 2.2e-15 85.9 97 46.4
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-15 85.5 108 38.9
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-15 85.5 108 38.9
BcaC08g45074 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-15 84.7 102 40.2
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 8.4e-15 84.0 105 39.0
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-14 82.4 102 38.2
C08p12840 Brassica napus HOM05D009405 ORTHO05D011711 2.4e-14 82.4 120 40.8
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-14 82.4 102 38.2
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-14 82.0 99 39.4
BolC7t41126H Brassica oleracea HOM05D009405 ORTHO05D011711 3.2e-14 82.0 78 50.0
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-14 81.3 102 39.2
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-14 80.5 99 39.4
BcaC01g01677 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-14 80.5 99 38.4
A09p30420 Brassica napus HOM05D000305 ORTHO05D000065 9.3e-14 80.5 99 38.4
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 9.3e-14 80.5 99 38.4
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 9.3e-14 80.5 99 38.4
BraA09t38611Z Brassica rapa HOM05D000305 ORTHO05D000065 9.3e-14 80.5 99 38.4
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 9.3e-14 80.5 99 38.4
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 1.6e-13 79.7 89 46.1
BcaC08g43906 Brassica carinata HOM05D009405 ORTHO05D011711 2.7e-13 79.0 111 43.2
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 2.7e-13 79.0 99 35.4
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-13 79.0 102 39.2
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-13 79.0 102 39.2
BcaC05g25372 Brassica carinata HOM05D009405 ORTHO05D011711 3.5e-13 78.6 75 53.3
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-13 78.6 102 38.2
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-13 78.6 102 38.2
BolSC21t60228H Brassica oleracea HOM05D009405 ORTHO05D011711 4.6e-13 78.2 76 52.6
BraA03t15640Z Brassica rapa HOM05D009405 ORTHO05D011711 6.0e-13 77.8 73 52.1
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-12 77.0 99 37.4
BcaC03g17448 Brassica carinata HOM05D010193 ORTHO05D012632 1.8e-12 76.3 104 40.4
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.8e-12 76.3 99 37.4
BcaC09g50939 Brassica carinata HOM05D009405 ORTHO05D011711 2.3e-12 75.9 111 42.3
CARHR217650 Cardamine hirsuta HOM05D000305 ORTHO05D000065 3.0e-12 75.5 101 33.7
BcaC02g09829 Brassica carinata HOM05D010193 ORTHO05D012632 5.1e-12 74.7 108 39.8
BcaC04g20435 Brassica carinata HOM05D000305 ORTHO05D000065 5.1e-12 74.7 102 36.3
A09p69300 Brassica napus HOM05D000305 ORTHO05D000065 5.1e-12 74.7 102 36.3
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-12 74.7 99 36.4
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 5.1e-12 74.7 99 36.4
BolC8t52920H Brassica oleracea HOM05D000305 ORTHO05D000065 5.1e-12 74.7 102 36.3
THA.LOC104822029 Tarenaya hassleriana HOM05D000305 ORTHO05D000065 6.7e-12 74.3 115 33.0
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-12 73.9 100 38.0
A02p25740 Brassica napus HOM05D009405 ORTHO05D011711 8.7e-12 73.9 104 42.3
BcaC02g07936 Brassica carinata HOM05D009405 ORTHO05D011711 1.1e-11 73.6 73 52.1
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 1.1e-11 73.6 93 35.5
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-11 73.6 99 35.4
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-11 73.6 104 35.6
BcaC07g37532 Brassica carinata HOM05D009405 ORTHO05D011711 1.9e-11 72.8 111 42.3
C03p74100 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-11 72.0 102 34.3
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-11 70.5 99 34.3
BcaC07g37156 Brassica carinata HOM05D009405 ORTHO05D011711 1.3e-10 70.1 72 50.0
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-10 69.7 85 38.8
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-10 69.7 85 38.8
BraA09t38529Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-10 69.3 93 35.5
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 2.8e-10 68.9 123 31.7
BcaB07g31691 Brassica carinata HOM05D010193 ORTHO05D012632 3.6e-10 68.6 67 49.3
BcaB07g31692 Brassica carinata HOM05D010193 ORTHO05D012632 3.6e-10 68.6 67 49.3
BcaB08g35018 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-10 67.8 100 34.0
C06p14800 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-09 66.6 99 35.4
AL8G20350 Arabidopsis lyrata HOM05D000305 ORTHO05D000065 1.8e-09 66.2 110 33.6
BcaC03g15510 Brassica carinata HOM05D010193 ORTHO05D012632 1.8e-09 66.2 80 43.8
BcaC03g15528 Brassica carinata HOM05D010193 ORTHO05D012632 6.9e-09 64.3 81 43.2
BolC6t36639H Brassica oleracea HOM05D010193 ORTHO05D012632 9.0e-09 63.9 78 46.2
C05p50120 Brassica napus HOM05D009405 ORTHO05D011711 1.2e-08 63.5 111 36.0
Sp7g09700 Schrenkiella parvula HOM05D010193 ORTHO05D011711 1.2e-08 63.5 75 40.0
BcaC08g44062 Brassica carinata HOM05D010193 ORTHO05D012632 2.0e-08 62.8 78 44.9
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-08 62.0 120 30.0
BcaC01g00622 Brassica carinata HOM05D000305 ORTHO05D000065 4.5e-08 61.6 94 31.9
BolC3t20490H Brassica oleracea HOM05D000305 ORTHO05D000065 4.5e-08 61.6 94 31.9
SpUn0001_0900 Schrenkiella parvula HOM05D000313 ORTHO05D000065 4.5e-08 61.6 124 31.5
C05p29580 Brassica napus HOM05D009405 ORTHO05D011711 5.8e-08 61.2 71 47.9
C09p37980 Brassica napus HOM05D002463 ORTHO05D002669 5.8e-08 61.2 67 47.8
BolC9t56635H Brassica oleracea HOM05D002463 ORTHO05D002669 5.8e-08 61.2 67 47.8
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-08 60.8 72 40.3
C03p67690 Brassica napus HOM05D009405 ORTHO05D011711 1.3e-07 60.1 80 43.8
BcaC01g05457 Brassica carinata HOM05D000305 ORTHO05D000065 2.2e-07 59.3 71 38.0
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-07 59.3 86 33.7
Thhalv10002217m.g Eutrema salsugineum HOM05D010193 ORTHO05D012632 2.2e-07 59.3 77 35.1
Sp6g01030 Schrenkiella parvula HOM05D000313 ORTHO05D000065 2.2e-07 59.3 100 31.0
C08p01650 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-07 58.9 85 32.9
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 58.2 71 38.0
Carub.0004s2878 Capsella rubella HOM05D000305 ORTHO05D000065 8.4e-07 57.4 107 29.0
Sp1g32040 Schrenkiella parvula HOM05D000305 ORTHO05D000065 8.4e-07 57.4 79 35.4
BolC4t24845H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-06 57.0 72 37.5
AL4G17880 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 1.4e-06 56.6 72 34.7
BcaC04g19021 Brassica carinata HOM05D014165 ORTHO05D016792 1.4e-06 56.6 31 80.6
BolC9t55998H Brassica oleracea HOM05D000305 ORTHO05D000065 1.4e-06 56.6 102 29.4
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-06 55.8 98 29.6
A02p19470 Brassica napus HOM05D000305 ORTHO05D000065 3.2e-06 55.5 102 29.4
C04p14760 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 55.5 75 36.0
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 55.5 67 38.8
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 55.5 67 38.8
BolC2t09236H Brassica oleracea HOM05D000305 ORTHO05D000065 3.2e-06 55.5 102 29.4
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-06 55.1 93 28.0
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-06 55.1 93 28.0
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-06 55.1 105 29.5
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-06 55.1 105 29.5
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-06 55.1 105 29.5
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-06 55.1 93 28.0
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 4.2e-06 55.1 99 33.3
Thhalv10002797m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 4.2e-06 55.1 74 36.5
AL7G49790 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 5.5e-06 54.7 81 38.3
BcaC04g21173 Brassica carinata HOM05D000305 ORTHO05D000065 5.5e-06 54.7 102 28.4
C06p10830 Brassica napus HOM05D000305 ORTHO05D000065 5.5e-06 54.7 102 28.4
C09p34550 Brassica napus HOM05D000305 ORTHO05D000065 5.5e-06 54.7 102 28.4
BolC9t56301H Brassica oleracea HOM05D000305 ORTHO05D000065 5.5e-06 54.7 102 28.4
BcaC06g34960 Brassica carinata HOM05D000305 ORTHO05D000065 7.1e-06 54.3 63 38.1
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 7.1e-06 54.3 98 30.6
BcaC04g21471 Brassica carinata HOM05D000305 ORTHO05D000065 9.3e-06 53.9 102 29.4
BcaC08g45073 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-06 53.9 70 37.1
BcaC08g45658 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-06 53.9 67 38.8
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.9 98 29.6
C06p34140 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.9 67 38.8
C09p31400 Brassica napus HOM05D000305 ORTHO05D000065 9.3e-06 53.9 102 29.4
Sp3g26990 Schrenkiella parvula HOM05D000305 ORTHO05D000065 9.3e-06 53.9 46 54.3


User provided reference genes

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