Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 7.0e-139 497.3 252 100.0
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 3.2e-123 445.3 250 90.8
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 7.1e-123 444.1 245 92.2
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 7.8e-122 440.7 245 91.4
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 3.9e-121 438.3 245 91.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.2e-119 433.3 246 90.2
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.2e-108 396.0 249 82.7
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 6.4e-108 394.4 253 81.0
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.1e-107 393.7 249 81.9
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.0e-105 387.1 251 81.7
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.9e-105 385.2 255 79.2
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 6.6e-105 384.4 266 75.6
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.1e-95 352.8 254 71.3
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 1.6e-74 283.5 254 61.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 5.1e-73 278.5 203 68.0
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.3e-72 275.4 211 67.3
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 9.7e-72 274.2 195 69.2
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 2.2e-71 273.1 239 60.7
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.2e-71 273.1 197 68.0
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.8e-71 272.7 193 71.5
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.5e-69 266.9 195 67.7
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 2.0e-69 266.5 221 63.3
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.0e-68 264.2 231 58.9
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.7e-68 263.5 201 66.7
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 2.9e-68 262.7 237 59.1
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 5.0e-68 261.9 223 60.1
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.9e-67 260.0 199 66.3
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 5.5e-67 258.5 219 63.5
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 7.2e-67 258.1 196 64.8
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 9.4e-67 257.7 213 62.4
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.6e-66 256.9 208 61.5
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.7e-66 256.1 224 58.9
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 4.7e-66 255.4 258 53.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 6.1e-66 255.0 198 66.2
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 3.9e-65 252.3 213 60.6
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.9e-65 252.3 242 55.8
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 6.7e-65 251.5 211 61.6
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 8.8e-65 251.1 237 56.1
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.5e-64 250.4 220 55.5
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.3e-64 249.2 229 57.2
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.4e-64 248.8 210 58.6
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.7e-64 248.4 194 66.0
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.3e-63 247.3 226 58.4
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.7e-63 246.9 239 54.4
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.2e-63 246.5 216 59.7
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.7e-63 245.7 234 56.4
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 4.8e-63 245.4 237 54.0
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.1e-62 244.2 193 64.2
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.4e-62 243.8 182 65.9
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.8e-62 243.4 245 50.2
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 3.1e-62 242.7 197 60.4
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 5.3e-62 241.9 274 50.4
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 7.0e-62 241.5 202 57.9
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.5e-61 240.4 218 56.9
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.5e-61 240.4 194 59.3
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.0e-61 240.0 206 57.3
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.0e-61 240.0 199 60.3
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.6e-61 239.6 210 55.2
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 4.5e-61 238.8 199 59.3
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 4.5e-61 238.8 218 55.0
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 7.7e-61 238.0 198 59.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 7.7e-61 238.0 212 56.1
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.0e-60 237.7 197 63.5
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.7e-60 236.9 159 68.6
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 6.5e-60 235.0 157 70.1
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 6.5e-60 235.0 155 69.7
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.1e-59 234.2 217 54.8
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.5e-59 233.0 215 58.6
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.5e-59 233.0 199 58.8
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 3.2e-59 232.6 199 58.8
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 5.5e-59 231.9 249 49.8
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 5.5e-59 231.9 171 64.9
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 9.4e-59 231.1 197 57.4
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 9.4e-59 231.1 185 59.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-58 230.7 250 53.2
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.2e-58 230.7 199 58.3
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.2e-58 230.7 199 58.3
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.1e-58 229.9 227 56.4
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.1e-58 229.9 197 57.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 2.7e-58 229.6 197 58.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.6e-58 229.2 189 59.8
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 4.7e-58 228.8 209 56.5
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 6.1e-58 228.4 209 56.5
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.4e-57 227.3 209 56.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.4e-57 227.3 158 67.1
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.3e-57 226.5 213 54.0
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.3e-57 226.5 238 52.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.7e-57 224.9 209 55.5
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 8.8e-57 224.6 203 57.1
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.7e-55 220.3 194 60.3
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.7e-55 220.3 210 56.7
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 7.0e-54 214.9 238 48.7
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.6e-53 213.8 259 49.8
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.6e-53 213.0 255 48.2
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 2.1e-50 203.4 196 54.1
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 5.2e-49 198.7 301 39.9
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.6e-48 196.4 126 70.6
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.1e-46 191.0 200 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.8e-41 173.7 183 46.4
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.8e-41 173.7 242 41.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 5.2e-41 172.2 234 40.2
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.4e-38 162.2 130 64.6
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 1.1e-30 137.9 149 51.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 2.0e-29 133.7 157 38.9
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 2.9e-28 129.8 154 40.9
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 8.0e-26 121.7 66 81.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 9.2e-22 108.2 91 59.3
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.0e-20 104.8 120 50.0
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 3.9e-20 102.8 212 33.0
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 9.5e-19 98.2 234 27.4
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.6e-16 90.1 141 37.6
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-15 85.9 75 53.3
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 1.3e-07 61.2 51 56.9
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 4.9e-07 59.3 61 49.2
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.1e-06 58.2 32 81.2
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.1e-06 58.2 32 81.2


User provided reference genes

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