Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.5e-79 299.7 173 100.0
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.6e-65 253.1 168 92.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 4.6e-65 251.5 153 99.3
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.3e-64 249.2 153 98.7
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-63 246.9 153 98.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 4.9e-59 231.5 153 93.5
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 7.9e-57 224.2 153 91.5
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.0e-56 222.2 153 89.5
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.5e-55 219.9 153 89.5
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 4.3e-55 218.4 153 90.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.4e-53 212.6 156 85.9
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 4.1e-53 211.8 149 87.9
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 6.9e-53 211.1 154 86.4
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 7.6e-52 207.6 147 87.8
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.0e-51 207.2 154 87.0
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 5.0e-51 204.9 147 87.1
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.2e-50 202.2 146 87.0
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 5.5e-50 201.4 158 81.6
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 4.2e-42 175.3 153 74.5
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 7.2e-42 174.5 167 67.7
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 3.6e-41 172.2 153 71.2
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 3.6e-41 172.2 156 69.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.8e-40 169.9 153 71.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.9e-40 168.7 155 70.3
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 8.8e-40 167.5 154 71.4
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.1e-39 167.2 150 72.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.1e-39 167.2 154 72.1
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.5e-39 166.8 155 70.3
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.5e-39 166.8 153 71.2
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 2.0e-39 166.4 154 70.1
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 3.3e-39 165.6 150 70.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 4.3e-39 165.2 153 72.5
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 5.7e-39 164.9 155 70.3
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 5.7e-39 164.9 151 72.2
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 5.7e-39 164.9 156 69.9
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 7.4e-39 164.5 153 69.3
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 9.7e-39 164.1 153 73.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.3e-38 163.7 152 69.1
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.3e-38 163.7 154 69.5
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.7e-38 163.3 155 69.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.7e-38 163.3 152 70.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.7e-38 163.3 154 69.5
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.7e-38 163.3 155 71.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.2e-38 162.9 159 66.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 2.2e-38 162.9 153 67.3
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.2e-38 162.9 155 69.7
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 2.8e-38 162.5 160 67.5
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 4.8e-38 161.8 152 67.1
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 6.3e-38 161.4 145 70.3
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 6.3e-38 161.4 154 68.8
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 8.2e-38 161.0 146 69.2
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.1e-37 160.6 156 70.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.4e-37 160.2 151 71.5
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.8e-37 159.8 155 67.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 3.1e-37 159.1 151 70.9
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 5.3e-37 158.3 150 73.3
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.2e-36 157.1 152 66.4
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 1.2e-36 157.1 155 67.7
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.0e-36 156.4 152 66.4
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.0e-36 156.4 152 67.8
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.6e-36 156.0 152 66.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.4e-36 155.6 156 67.9
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.5e-36 155.2 156 66.7
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.9e-36 154.8 163 65.6
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 7.7e-36 154.5 154 66.9
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.0e-35 154.1 152 66.4
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-35 153.7 143 63.6
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.7e-35 153.3 149 66.4
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 3.8e-35 152.1 164 62.2
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 5.0e-35 151.8 151 65.6
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.1e-34 150.6 155 68.4
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.4e-34 150.2 155 65.2
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.4e-34 150.2 157 65.0
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.5e-34 149.4 154 66.2
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 5.5e-34 148.3 152 65.8
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 7.2e-34 147.9 159 63.5
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 7.2e-34 147.9 143 67.1
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 9.4e-34 147.5 129 62.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.1e-33 146.4 143 68.5
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.7e-33 146.0 191 57.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.6e-33 145.6 153 66.7
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 7.9e-33 144.4 143 66.4
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.8e-32 143.3 153 64.7
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 3.0e-32 142.5 184 46.7
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 6.7e-32 141.4 184 57.1
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.3e-30 137.1 155 63.2
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.7e-30 135.6 111 75.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.4e-29 133.7 136 66.9
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 3.1e-29 132.5 104 74.0
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 4.1e-29 132.1 116 69.8
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.2e-28 130.6 104 74.0
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.7e-27 126.7 151 56.3
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 2.7e-25 119.4 104 69.2
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.6e-25 119.0 156 60.9
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 6.1e-25 118.2 163 44.2
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 8.0e-25 117.9 190 42.1
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.0e-24 117.5 103 65.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.6e-23 112.8 68 75.0
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 3.3e-23 112.5 150 48.0
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.7e-22 109.0 129 56.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 1.6e-20 103.6 154 52.6
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 6.5e-19 98.2 99 56.6
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 4.1e-13 79.0 91 49.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.3e-11 73.9 59 64.4
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 5.0e-11 72.0 155 35.5
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 1.8e-08 63.5 96 38.5
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.8e-08 63.5 98 45.9
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 7.5e-07 58.2 53 50.9


User provided reference genes

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