Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 0.0e+00 1518.1 791 100.0
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 0.0e+00 1482.2 776 99.6
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 0.0e+00 1441.4 792 95.1
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 0.0e+00 1417.1 782 95.3
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 0.0e+00 1372.8 798 91.9
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 0.0e+00 1280.0 808 84.4
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 0.0e+00 1257.3 806 83.3
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 0.0e+00 1256.9 809 83.3
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 0.0e+00 1256.1 809 83.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 0.0e+00 1234.6 808 81.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 0.0e+00 1211.4 804 81.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 0.0e+00 1131.3 818 74.2
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.4e-297 1026.2 810 69.8
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.0e-244 850.5 787 59.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.1e-241 840.5 802 57.6
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 3.4e-240 835.5 815 56.1
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.3e-239 833.6 801 56.7
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.8e-239 832.0 811 56.5
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.8e-239 832.0 811 56.5
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 7.9e-237 824.3 820 54.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 3.0e-236 822.4 806 56.3
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.9e-235 819.7 813 55.4
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 5.6e-235 818.1 812 55.7
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.6e-234 816.6 812 55.3
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 3.1e-233 812.4 815 54.6
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 5.3e-233 811.6 822 55.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.9e-231 805.8 819 53.8
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 2.9e-231 805.8 822 53.6
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.2e-229 800.4 814 54.2
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 7.9e-229 797.7 818 55.1
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 7.9e-229 797.7 802 55.4
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.0e-228 797.3 802 55.7
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.9e-228 795.4 802 55.6
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 3.3e-227 792.3 830 53.5
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 3.7e-226 788.9 803 55.0
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 8.2e-226 787.7 792 54.7
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.4e-224 782.3 818 53.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.2e-221 773.9 828 52.7
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 3.0e-220 769.2 793 54.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 8.2e-218 761.1 801 52.6
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 4.1e-217 758.8 790 53.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 7.7e-216 754.6 823 52.1
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.4e-212 743.8 813 49.9
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.8e-212 743.4 787 52.1
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.3e-212 743.0 813 49.9
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.1e-211 740.7 793 52.2
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 5.7e-211 738.4 801 52.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 9.7e-211 737.6 830 50.0
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.7e-210 736.9 799 51.3
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 3.7e-210 735.7 794 51.5
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.4e-209 733.8 830 50.0
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.8e-209 733.4 788 53.3
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 2.4e-209 733.0 790 51.0
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 4.1e-209 732.3 829 49.7
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 5.3e-209 731.9 787 50.8
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.2e-208 730.7 801 51.7
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.5e-208 730.3 808 50.2
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.5e-208 730.3 830 49.3
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.9e-207 726.1 806 49.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.5e-207 724.9 788 50.9
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.5e-207 724.9 793 50.1
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 3.2e-206 722.6 787 49.6
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 3.2e-206 722.6 806 49.5
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 9.4e-206 721.1 793 50.3
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.8e-204 716.8 794 50.5
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.3e-204 716.5 811 51.2
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 8.2e-202 708.0 818 50.6
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.8e-201 706.8 806 48.9
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 3.1e-201 706.1 792 51.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 7.0e-201 704.9 788 51.0
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.0e-200 703.4 817 50.2
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.0e-200 703.4 805 50.1
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.7e-199 700.3 814 48.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.1e-198 697.6 831 48.0
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.9e-198 696.8 807 48.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 7.5e-195 684.9 734 51.8
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 9.7e-195 684.5 751 49.9
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.4e-193 680.6 724 52.1
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.1e-193 679.1 795 50.6
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.7e-191 673.7 740 51.2
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 5.0e-191 672.2 811 48.6
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.1e-182 644.4 831 47.4
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.4e-180 637.5 796 46.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 2.0e-179 633.6 798 46.6
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 4.1e-177 625.9 811 46.2
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 5.0e-175 619.0 817 45.2
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 6.1e-173 612.1 830 43.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 5.4e-169 599.0 640 52.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.8e-165 586.6 813 43.3
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.8e-165 586.6 605 53.7
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.9e-162 576.6 781 45.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.7e-162 576.2 613 51.9
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.2e-144 518.1 739 44.9
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.9e-142 510.8 608 46.7
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 5.3e-140 502.7 796 37.7
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.3e-138 498.0 547 50.5
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.3e-130 471.5 393 62.1
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.4e-129 467.2 562 47.7
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 2.4e-124 450.7 774 38.5
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.7e-120 437.2 475 51.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.8e-108 397.9 512 47.1
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 5.9e-107 392.9 744 38.4
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-100 371.7 340 57.9
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 3.0e-87 327.4 919 29.1
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.5e-82 309.3 306 54.6
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.1e-81 308.9 275 58.5
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 9.4e-81 305.8 877 29.8
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.0e-71 274.2 471 40.6
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.8e-66 257.3 292 50.7
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 3.6e-64 250.8 805 28.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.2e-60 237.7 199 64.8
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 8.6e-58 229.6 193 62.7
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.5e-57 228.8 357 38.4
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.0e-52 209.9 254 45.7
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.8e-48 198.0 584 29.8
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 5.8e-46 190.3 529 26.7
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.7e-29 135.6 190 46.8
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 1.1e-23 116.3 626 23.5
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 6.6e-18 97.1 71 63.4
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 2.7e-11 75.1 370 26.2


User provided reference genes

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