Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 1.1e-240 836.3 433 100.0
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.2e-239 832.8 433 99.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 2.4e-232 808.5 433 97.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 2.4e-232 808.5 433 97.0
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.9e-224 782.3 433 94.2
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 5.5e-208 727.6 433 86.8
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 1.5e-205 719.5 437 85.1
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.1e-203 713.4 434 85.0
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 7.0e-203 710.7 434 84.3
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 3.9e-198 694.9 432 84.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 4.4e-197 691.4 441 81.4
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.3e-166 589.3 442 71.9
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.4e-155 553.5 424 67.5
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 7.3e-128 461.5 400 58.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.9e-124 449.5 429 55.9
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 4.2e-123 445.7 437 55.4
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 4.2e-123 445.7 433 54.3
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.3e-123 444.5 427 54.6
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 7.9e-122 441.4 437 53.8
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.8e-121 440.3 408 57.1
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 2.3e-121 439.9 432 55.3
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.5e-120 436.4 395 55.2
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.3e-120 436.0 427 55.3
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.4e-120 434.9 431 54.1
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 5.3e-118 428.7 429 53.8
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 6.5e-116 421.8 442 53.2
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 6.5e-116 421.8 432 53.7
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 8.4e-116 421.4 423 55.8
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.1e-115 421.0 399 53.6
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.9e-115 420.2 399 53.6
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 4.2e-115 419.1 400 54.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.2e-115 419.1 420 54.5
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 9.3e-115 417.9 434 53.2
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.6e-114 417.2 430 52.8
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.1e-114 416.8 410 53.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 2.7e-114 416.4 431 54.1
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 4.6e-114 415.6 422 53.6
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.6e-114 415.6 412 54.9
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.0e-114 415.2 420 54.5
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.9e-113 412.5 399 54.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 6.7e-113 411.8 437 52.9
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.7e-113 411.4 414 54.3
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 8.7e-113 411.4 410 53.2
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 8.7e-113 411.4 401 55.6
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 5.7e-112 408.7 409 54.5
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.6e-112 407.9 438 53.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.3e-111 407.5 444 49.5
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.6e-111 407.1 387 55.6
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.1e-111 406.8 400 52.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 2.8e-111 406.4 399 53.6
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 2.8e-111 406.4 441 48.5
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.8e-111 406.4 436 48.9
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 4.8e-111 405.6 422 51.7
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 4.8e-111 405.6 427 52.0
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 8.2e-111 404.8 384 54.4
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 8.2e-111 404.8 384 54.7
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.2e-111 404.8 398 55.5
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.1e-110 402.9 432 50.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 3.1e-110 402.9 412 52.2
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 6.9e-110 401.7 428 54.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.5e-109 400.6 418 51.9
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 2.6e-109 399.8 384 53.9
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.0e-108 397.9 397 52.9
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.0e-108 397.9 423 51.8
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 2.9e-108 396.4 424 51.9
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.1e-107 394.4 424 50.9
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.6e-106 390.6 417 52.3
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.0e-105 386.3 405 51.4
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 6.7e-105 385.2 407 52.6
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 3.3e-104 382.9 429 49.7
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 9.0e-102 374.8 387 52.2
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 7.2e-99 365.2 348 54.9
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.5e-96 356.7 423 47.0
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.8e-95 352.4 428 45.3
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.4e-94 350.9 341 55.7
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.5e-93 347.4 354 52.8
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.9e-83 313.9 385 46.0
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.2e-82 311.2 415 43.9
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.6e-82 310.8 415 43.9
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.0e-81 308.1 327 51.7
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.2e-75 285.4 394 41.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.1e-74 283.9 331 46.5
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 2.7e-74 283.5 296 52.4
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 5.9e-69 265.8 316 50.0
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 8.0e-66 255.4 381 39.1
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.4e-65 254.6 362 41.2
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 5.2e-65 252.7 407 39.1
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 8.6e-60 235.3 417 36.2
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 9.5e-59 231.9 259 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 6.1e-58 229.2 314 44.6
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 2.9e-55 220.3 332 40.1
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 5.2e-49 199.5 377 35.8
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.5e-48 198.0 243 46.1
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 7.8e-45 185.7 407 32.7
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 4.6e-37 159.8 253 39.9
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 4.3e-35 153.3 116 63.8
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 2.1e-34 151.0 241 38.6
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 3.4e-32 143.7 597 24.1
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 5.4e-30 136.3 128 51.6
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.8e-26 124.0 132 47.0
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.4e-22 111.7 134 49.3
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 7.3e-19 99.4 81 60.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 4.0e-17 93.6 105 46.7
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 7.6e-16 89.4 377 24.7
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.7e-15 88.2 75 57.3
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.4e-15 85.9 79 50.6
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.1e-14 85.5 79 53.2
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.7e-13 80.9 62 64.5
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.3e-12 77.8 77 48.1
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.2e-07 61.2 62 50.0
BolC7t45491H Brassica oleracea HOM05D000761 ORTHO05D028316 3.2e-06 57.4 68 52.9
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 3.2e-06 57.4 37 73.0


User provided reference genes

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