Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 6.1e-52 207.2 106 100.0
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.8e-51 205.7 106 99.1
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 3.0e-51 204.9 106 99.1
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 7.5e-50 200.3 106 97.2
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.2e-47 193.0 106 95.3
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.2e-47 193.0 106 95.3
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.2e-46 188.7 106 91.5
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 2.6e-42 175.3 106 89.6
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 4.4e-42 174.5 106 89.6
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 2.2e-41 172.2 106 87.7
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 2.2e-41 172.2 106 87.7
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 2.2e-41 172.2 106 87.7
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 2.2e-41 172.2 106 87.7
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 4.1e-40 167.9 106 85.8
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 7.0e-40 167.2 102 88.2
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 9.2e-40 166.8 106 84.9
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 3.4e-34 148.3 101 80.2
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.7e-33 146.0 106 74.5
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.4e-32 141.0 107 75.7
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.0e-30 135.2 104 68.3
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.9e-29 132.5 104 70.2
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 3.3e-29 131.7 104 68.3
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.6e-28 129.4 104 69.2
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 8.0e-28 127.1 105 65.7
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 8.0e-28 127.1 105 65.7
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 8.0e-28 127.1 105 65.7
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.8e-27 125.9 99 68.7
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 3.1e-27 125.2 100 67.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 4.0e-27 124.8 98 69.4
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 6.8e-27 124.0 105 66.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 8.9e-27 123.6 105 68.6
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 8.9e-27 123.6 104 64.4
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 8.9e-27 123.6 100 66.0
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.2e-26 123.2 104 64.4
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.5e-26 122.9 105 63.8
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.5e-26 122.9 105 65.7
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 3.4e-26 121.7 104 63.5
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 4.4e-26 121.3 104 62.5
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 5.8e-26 120.9 104 63.5
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.7e-25 119.4 104 63.5
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.7e-25 119.4 99 65.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 2.2e-25 119.0 104 62.5
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.2e-25 119.0 104 63.5
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 2.9e-25 118.6 104 60.6
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 3.7e-25 118.2 100 64.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 3.7e-25 118.2 104 64.4
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 3.7e-25 118.2 104 66.3
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 4.9e-25 117.9 104 63.5
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 8.3e-25 117.1 103 65.0
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.4e-24 116.3 98 65.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 1.9e-24 115.9 100 63.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.9e-24 115.9 101 65.3
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.9e-24 115.9 99 64.6
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.2e-24 115.2 104 62.5
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 3.2e-24 115.2 99 63.6
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 5.4e-24 114.4 100 62.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 5.4e-24 114.4 100 63.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.2e-23 113.2 100 61.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 1.2e-23 113.2 104 60.6
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.6e-23 112.8 104 61.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 3.5e-23 111.7 104 60.6
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 4.6e-23 111.3 104 59.6
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 6.0e-23 110.9 100 60.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 6.0e-23 110.9 104 60.6
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 6.0e-23 110.9 104 60.6
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 7.8e-23 110.5 105 60.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 7.8e-23 110.5 107 58.9
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.0e-22 110.2 103 60.2
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.3e-22 109.8 106 60.4
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.3e-22 109.8 105 59.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.3e-22 109.8 107 58.9
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.3e-22 109.8 100 62.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-22 109.4 101 60.4
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 1.7e-22 109.4 106 56.6
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.7e-22 109.4 101 64.4
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 3.9e-22 108.2 102 61.8
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 5.0e-22 107.8 103 59.2
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.1e-21 106.7 103 63.1
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.5e-21 106.3 103 64.1
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.9e-21 105.9 106 54.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.5e-21 105.5 104 59.6
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 3.3e-21 105.1 94 63.8
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.6e-20 102.8 102 58.8
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-20 102.4 101 57.4
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 4.7e-20 101.3 100 59.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 6.2e-20 100.9 104 56.7
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 8.1e-20 100.5 101 56.4
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 8.1e-20 100.5 92 59.8
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.8e-19 99.4 101 55.4
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 4.0e-19 98.2 100 56.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.5e-18 96.3 84 69.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.5e-18 96.3 95 57.9
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.6e-15 84.7 107 51.4
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.3e-14 82.4 87 55.2
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 6.6e-14 80.9 95 52.6
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 7.3e-13 77.4 88 52.3
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 3.1e-11 72.0 66 62.1
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 4.4e-10 68.2 66 60.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 7.6e-10 67.4 98 45.9


User provided reference genes

Program Settings