Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p37850 Brassica napus HOM05D000249 ORTHO05D028282 1.1e-44 183.0 92 100.0
BcaC08g46596 Brassica carinata HOM05D000249 ORTHO05D000206 9.1e-36 153.3 84 94.0
BraA07t31349Z Brassica rapa HOM05D000249 ORTHO05D028282 2.0e-35 152.1 84 92.9
Carub.0007s0348 Capsella rubella HOM05D000249 ORTHO05D000206 6.5e-18 94.0 80 66.2
BcaC08g45761 Brassica carinata HOM05D000249 ORTHO05D000206 1.9e-17 92.4 82 67.1
C06p35430 Brassica napus HOM05D000249 ORTHO05D000206 1.9e-17 92.4 82 67.1
BolC6t38651H Brassica oleracea HOM05D000249 ORTHO05D000206 1.9e-17 92.4 82 67.1
BolC6t38660H Brassica oleracea HOM05D000249 ORTHO05D000206 1.9e-17 92.4 82 67.1
BolC6t38657H Brassica oleracea HOM05D000249 ORTHO05D000206 9.5e-17 90.1 78 64.1
BolC6t38664H Brassica oleracea HOM05D000249 ORTHO05D000206 9.5e-17 90.1 78 64.1
A07p30630 Brassica napus HOM05D000249 ORTHO05D000206 6.3e-13 77.4 54 75.9
BraA07t30698Z Brassica rapa HOM05D000249 ORTHO05D000206 6.3e-13 77.4 54 75.9
Thhalv10006011m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.1e-12 76.6 82 56.1
AL2G28170 Arabidopsis lyrata HOM05D000249 ORTHO05D017420 3.1e-12 75.1 71 60.6
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.1e-12 74.7 87 50.6
AL7G14590 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.5e-11 71.6 75 56.0
AL7G30180 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.5e-11 71.6 71 57.7
AT3G24610 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 3.8e-10 68.2 86 46.5
AL7G11730 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.0e-10 67.8 83 54.2
AL7G32560 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.0e-10 67.8 79 49.4
Carub.0007s1993 Capsella rubella HOM05D000249 ORTHO05D000206 5.0e-10 67.8 84 50.0
Thhalv10027538m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.1e-09 66.6 74 55.4
Carub.0011s0005 Capsella rubella HOM05D000249 ORTHO05D000206 1.9e-09 65.9 79 50.6
CARHR210870 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.9e-09 65.9 82 50.0
Thhalv10025580m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.6e-09 64.3 63 60.3
C06p45750 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-08 63.2 37 86.5
Carub.0007s0234 Capsella rubella HOM05D000249 ORTHO05D000206 2.1e-08 62.4 82 50.0
CARHR245230 Cardamine hirsuta HOM05D000249 ORTHO05D028282 2.1e-08 62.4 72 52.8
Carub.0002s2327 Capsella rubella HOM05D000249 ORTHO05D000206 2.8e-08 62.0 62 58.1
A10p12790 Brassica napus HOM05D000249 ORTHO05D000206 4.7e-08 61.2 77 53.2
BraA10t43371Z Brassica rapa HOM05D000249 ORTHO05D000206 4.7e-08 61.2 77 53.2
Carub.0007s0183 Capsella rubella HOM05D000249 ORTHO05D000206 4.7e-08 61.2 68 54.4
CARHR246590 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.0e-08 60.5 91 44.0
BcaC06g35639 Brassica carinata HOM05D000249 ORTHO05D000206 1.0e-07 60.1 79 49.4
C02p09060 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-07 60.1 79 49.4
C07p12640 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-07 60.1 79 49.4
C07p12660 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-07 60.1 79 49.4
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 1.0e-07 60.1 79 49.4
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.8e-07 59.3 86 45.3
BcaNung05422 Brassica carinata HOM05D000249 ORTHO05D000206 1.8e-07 59.3 78 47.4
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.3e-07 58.9 68 52.9
C01p08810 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-07 58.9 85 48.2
BolC1t00871H Brassica oleracea HOM05D000249 ORTHO05D000206 2.3e-07 58.9 85 48.2
Thhalv10028916m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.3e-07 58.9 72 45.8
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 3.0e-07 58.5 84 48.8
BraA06t24071Z Brassica rapa HOM05D000249 ORTHO05D014429 3.0e-07 58.5 71 50.7
Thhalv10022697m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.0e-07 58.2 82 47.6
A06p08740 Brassica napus HOM05D000249 ORTHO05D014429 5.2e-07 57.8 70 52.9
BcaC05g25412 Brassica carinata HOM05D000249 ORTHO05D014429 6.8e-07 57.4 63 52.4
C05p12880 Brassica napus HOM05D000249 ORTHO05D014429 6.8e-07 57.4 63 52.4
BolC5t30035H Brassica oleracea HOM05D000249 ORTHO05D014429 6.8e-07 57.4 63 52.4
AL6G46400 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.9e-07 57.0 53 54.7
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 8.9e-07 57.0 66 53.0
BcaC05g25104 Brassica carinata HOM05D000249 ORTHO05D014429 1.2e-06 56.6 70 51.4
A01p00990 Brassica napus HOM05D000249 ORTHO05D024028 1.2e-06 56.6 67 52.2
BraA01t00097Z Brassica rapa HOM05D000249 ORTHO05D024028 1.2e-06 56.6 67 52.2
Thhalv10027293m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-06 56.6 78 51.3
BolC7t46634H Brassica oleracea HOM05D000249 ORTHO05D015901 1.5e-06 56.2 81 43.2
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 2.0e-06 55.8 53 52.8
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 2.0e-06 55.8 53 52.8
A03p62220 Brassica napus HOM05D000249 ORTHO05D032890 2.6e-06 55.5 53 62.3
BraA03t15259Z Brassica rapa HOM05D000249 ORTHO05D032890 2.6e-06 55.5 53 62.3
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.4e-06 55.1 55 50.9
C07p01540 Brassica napus HOM05D000249 ORTHO05D000206 3.4e-06 55.1 79 46.8
BcaC09g51808 Brassica carinata HOM05D000249 ORTHO05D015901 5.7e-06 54.3 88 43.2
CARHR286140 Cardamine hirsuta HOM05D000249 ORTHO05D000206 5.7e-06 54.3 79 44.3
AL1G65410 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.5e-06 53.9 82 40.2
BcaNung04321 Brassica carinata HOM05D000249 ORTHO05D032890 7.5e-06 53.9 81 45.7
A08p30690 Brassica napus HOM05D000249 ORTHO05D000206 9.8e-06 53.5 75 44.0
BraA08t34999Z Brassica rapa HOM05D000249 ORTHO05D000206 9.8e-06 53.5 75 44.0
Thhalv10002964m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 9.8e-06 53.5 78 46.2


User provided reference genes

Program Settings