Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 2.9e-54 214.9 105 100.0
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 1.1e-53 213.0 104 100.0
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-50 203.0 104 94.2
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 6.5e-46 187.2 104 86.5
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 6.5e-46 187.2 104 86.5
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-45 186.0 104 85.6
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-44 183.0 104 84.6
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-44 183.0 104 84.6
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.2e-44 183.0 104 84.6
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 6.1e-44 180.6 104 83.7
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 6.1e-44 180.6 104 83.7
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 8.8e-43 176.8 101 84.2
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 8.8e-43 176.8 101 84.2
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 3.1e-40 168.3 101 80.2
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.1e-40 168.3 101 80.2
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.9e-37 159.1 91 80.2
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-37 158.7 89 84.3
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.0e-34 149.1 102 67.6
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.8e-32 142.5 104 63.5
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-32 141.7 105 63.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-32 141.7 105 63.8
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 2.0e-31 139.0 106 63.2
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 2.0e-31 139.0 106 63.2
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 4.5e-31 137.9 106 64.2
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 4.5e-31 137.9 106 64.2
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.7e-31 137.1 104 61.5
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.7e-31 137.1 104 64.4
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-30 136.0 107 62.6
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.2e-30 135.6 100 67.0
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.8e-30 134.8 104 59.6
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 1.9e-29 132.5 103 70.9
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 3.2e-29 131.7 97 64.9
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.8e-27 125.9 83 74.7
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 3.0e-27 125.2 94 61.7
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.4e-26 121.3 104 58.7
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 2.8e-25 118.6 104 56.7
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 4.8e-25 117.9 92 70.7
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.4e-24 116.3 89 64.0
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.3e-22 109.8 101 52.5
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 2.2e-22 109.0 74 70.3
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.9e-22 108.6 91 60.4
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.2e-21 104.8 90 53.3
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-20 101.3 104 48.1
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 4.7e-20 101.3 101 47.5
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-19 100.1 103 49.5
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.0e-19 100.1 104 46.2
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.4e-19 99.8 100 53.0
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.8e-19 99.4 103 48.5
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.3e-19 99.0 107 52.3
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 4.0e-19 98.2 104 46.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 4.0e-19 98.2 104 46.2
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 6.8e-19 97.4 104 49.0
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 6.8e-19 97.4 104 46.2
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-18 96.3 104 49.0
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 1.5e-18 96.3 104 49.0
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 4.4e-18 94.7 101 45.5
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 4.4e-18 94.7 101 45.5
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-17 92.0 104 47.1
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.1e-16 90.1 68 55.9
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.1e-16 90.1 101 47.5
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-16 89.0 78 55.1
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-16 89.0 104 46.2
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.5e-15 84.7 102 49.0
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 5.0e-14 81.3 98 43.9
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 5.0e-14 81.3 100 44.0
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 1.1e-13 80.1 93 46.2
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.5e-13 79.0 95 45.3
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 7.2e-13 77.4 82 48.8
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.5e-13 77.0 82 46.3
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.7e-12 75.5 91 48.4
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.0e-12 73.9 64 57.8
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-10 70.1 80 43.8
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.2e-10 70.1 56 53.6
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 7.7e-07 57.4 55 52.7
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 2.3e-06 55.8 52 51.9


User provided reference genes

Program Settings