Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p35230 Brassica napus HOM05D010273 ORTHO05D012607 6.8e-78 293.9 146 100.0
BraA07t31116Z Brassica rapa HOM05D010273 ORTHO05D012607 2.4e-70 268.9 133 99.2
C01p36020 Brassica napus HOM05D010273 ORTHO05D012607 1.1e-67 260.0 146 89.7
BolC1t03559H Brassica oleracea HOM05D010273 ORTHO05D012607 1.9e-67 259.2 133 94.7
C06p41040 Brassica napus HOM05D010273 ORTHO05D012607 1.3e-65 253.1 142 90.1
C06p41050 Brassica napus HOM05D010273 ORTHO05D012607 1.2e-53 213.4 130 83.1
BolC6t39324H Brassica oleracea HOM05D010273 ORTHO05D012607 1.2e-53 213.4 130 83.1
Sp5g23960 Schrenkiella parvula HOM05D010273 ORTHO05D012607 2.2e-52 209.1 129 77.5
THA.LOC104822054 Tarenaya hassleriana HOM05D010093 ORTHO05D012145 3.7e-23 112.1 118 49.2
Aa31LG8G7940 Aethionema arabicum HOM05D010093 ORTHO05D012145 2.7e-18 95.9 117 46.2
BcaC03g13873 Brassica carinata HOM05D010093 ORTHO05D012145 5.7e-16 88.2 105 41.9
Aa31LG5G3400 Aethionema arabicum HOM05D010093 ORTHO05D012145 3.1e-14 82.4 126 39.7
Aa31LG2G14900 Aethionema arabicum HOM05D010093 ORTHO05D012145 9.1e-14 80.9 100 42.0
Aa31LG5G1770 Aethionema arabicum HOM05D010093 ORTHO05D012145 9.1e-14 80.9 117 41.9
Aa31LG9G15120 Aethionema arabicum HOM05D010093 ORTHO05D012145 2.6e-13 79.3 123 39.0
Aa31LG5G5310 Aethionema arabicum HOM05D010093 ORTHO05D012145 7.7e-13 77.8 117 40.2
Aa31LG5G6160 Aethionema arabicum HOM05D010093 ORTHO05D012145 7.7e-13 77.8 118 42.4
Aa31LG10G13000 Aethionema arabicum HOM05D010093 ORTHO05D012145 2.2e-12 76.3 116 34.5
Aa31sc1090G10 Aethionema arabicum HOM05D010093 ORTHO05D012145 3.8e-12 75.5 117 39.3
Aa31LG2G14930 Aethionema arabicum HOM05D010093 ORTHO05D012145 6.5e-12 74.7 123 37.4
Aa31LG7G11220 Aethionema arabicum HOM05D010093 ORTHO05D012145 6.5e-12 74.7 112 40.2
Aa31LG5G4380 Aethionema arabicum HOM05D010093 ORTHO05D012145 8.5e-12 74.3 117 38.5
Aa31LG2G12230 Aethionema arabicum HOM05D010093 ORTHO05D012145 1.5e-11 73.6 98 38.8
Aa31LG3G15620 Aethionema arabicum HOM05D010093 ORTHO05D012145 1.5e-11 73.6 91 40.7
Aa31LG2G14880 Aethionema arabicum HOM05D010093 ORTHO05D012145 3.2e-11 72.4 98 38.8
BolC6t39325H Brassica oleracea HOM05D010273 ORTHO05D012607 3.2e-11 72.4 36 94.4
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.7e-10 69.3 113 35.4
QL04p084567 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-10 68.6 119 33.6
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-09 67.4 101 35.6
Aa31LG2G14890 Aethionema arabicum HOM05D010093 ORTHO05D012145 1.4e-09 67.0 88 38.6
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-09 66.2 91 35.2
Rhsim04G0047100 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.2e-09 65.1 100 37.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 8.8e-09 64.3 115 33.9
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-08 63.9 132 29.5
QL04p045400 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-08 62.8 98 31.6
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 2.6e-08 62.8 88 34.1
Sc21g0002580 Simmondsia chinensis HOM05D000003 ORTHO05D000126 2.6e-08 62.8 118 28.0
AUR62008807 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.3e-08 62.4 123 29.3
Rhsim01G0139400 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.4e-08 62.0 97 30.9
RhsimUnG0009800 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.4e-08 62.0 97 34.0
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-08 61.2 127 32.3
Rhsim02G0217100 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.5e-08 61.2 88 33.0
QL05p049637 Quercus lobata HOM05D000003 ORTHO05D000126 9.7e-08 60.8 111 29.7
Lj2g0007703 Lotus japonicus HOM05D000003 ORTHO05D000126 1.3e-07 60.5 125 29.6
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.7e-07 60.1 104 31.7
Lj4g0020141 Lotus japonicus HOM05D000003 ORTHO05D000126 1.7e-07 60.1 125 29.6
SEGI_01720 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-07 60.1 111 31.5
SEGI_14237 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-07 60.1 99 30.3
EL10Ac8g19714 Beta vulgaris HOM05D000003 ORTHO05D000126 2.2e-07 59.7 130 28.5
QL01p027611 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 59.7 104 28.8
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 2.2e-07 59.7 117 29.1
Sc12g0003020 Simmondsia chinensis HOM05D000003 ORTHO05D000126 2.8e-07 59.3 92 31.5
Eucgr.K02013 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.7e-07 58.9 95 30.5
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-07 58.9 127 26.0
SEGI_10348 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.8e-07 58.5 105 31.4
QL04p002610 Quercus lobata HOM05D000038 ORTHO05D000126 6.3e-07 58.2 109 28.4
Rhsim07G0162600 Rhododendron simsii HOM05D000358 ORTHO05D005121 6.3e-07 58.2 97 30.9
Sed0009453 Sechium edule HOM05D000003 ORTHO05D000126 6.3e-07 58.2 113 31.0
QL03p070144 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-07 57.8 140 25.7
QL05p033866 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-07 57.8 61 39.3
Rhsim03G0083400 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.2e-07 57.8 102 28.4
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.2e-07 57.8 102 29.4
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.2e-07 57.8 92 29.3
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 8.2e-07 57.8 120 28.3
QL08p015957 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.4 126 26.2
Rhsim04G0053400 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.1e-06 57.4 95 31.6
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-06 57.4 91 28.6
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 1.1e-06 57.4 75 33.3
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.4e-06 57.0 110 32.7
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-06 57.0 130 26.2
Sed0000613 Sechium edule HOM05D000003 ORTHO05D000126 1.4e-06 57.0 101 29.7
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 1.8e-06 56.6 116 27.6
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-06 56.6 99 28.3
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-06 56.6 88 30.7
Sc14g0005410 Simmondsia chinensis HOM05D000003 ORTHO05D000126 1.8e-06 56.6 99 31.3
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.4e-06 56.2 117 25.6
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.4e-06 56.2 112 27.7
Rhsim11G0002700 Rhododendron simsii HOM05D059582 ORTHO05D000126 2.4e-06 56.2 112 27.7
SEGI_32181 Sequoiadendron giganteum HOM05D002670 ORTHO05D003079 2.4e-06 56.2 117 29.9
COL.COLO4_18925 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.1e-06 55.8 95 28.4
QL93p0120_0010 Quercus lobata HOM05D000003 ORTHO05D000126 3.1e-06 55.8 134 25.4
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.1e-06 55.5 92 30.4
Psat1g039760 Pisum sativum HOM05D000003 ORTHO05D000126 4.1e-06 55.5 100 35.0
QL06p049455 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-06 55.5 122 27.9
Eucgr.D01521 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.3e-06 55.1 93 29.0
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 5.3e-06 55.1 98 28.6
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.3e-06 55.1 123 28.5
Rhsim07G0116500 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.3e-06 55.1 90 32.2
Atru.chr3.1630 Acer truncatum HOM05D000003 ORTHO05D000126 7.0e-06 54.7 80 33.8
Aqoxy1G02614 Aquilegia oxysepala HOM05D000003 ORTHO05D000126 7.0e-06 54.7 81 33.3
AUR62001732 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.0e-06 54.7 117 25.6
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-06 54.7 98 29.6
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.0e-06 54.7 95 35.8
Rhsim09G0090900 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.0e-06 54.7 108 31.5
SEGI_23951 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 7.0e-06 54.7 105 30.5
QL03p012601 Quercus lobata HOM05D000003 ORTHO05D000126 9.1e-06 54.3 124 26.6
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 9.1e-06 54.3 120 29.2


User provided reference genes

Program Settings