Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p34840 Brassica napus HOM05D003134 ORTHO05D003500 7.7e-66 253.8 143 100.0
BraA07t31102Z Brassica rapa HOM05D003134 ORTHO05D003500 7.7e-66 253.8 143 100.0
C06p41530 Brassica napus HOM05D003134 ORTHO05D003500 1.8e-62 242.7 143 93.7
BolC6t39271H Brassica oleracea HOM05D003134 ORTHO05D003500 1.8e-62 242.7 143 93.7
BcaC08g46282 Brassica carinata HOM05D003134 ORTHO05D003500 8.8e-62 240.4 143 93.0
BcaC08g46286 Brassica carinata HOM05D003134 ORTHO05D003500 1.7e-57 226.1 143 90.2
BcaB03g15807 Brassica carinata HOM05D003134 ORTHO05D003500 4.7e-55 218.0 146 86.3
Sp5g23500 Schrenkiella parvula HOM05D003134 ORTHO05D003500 2.2e-52 209.1 150 78.7
Thhalv10019521m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 2.7e-50 202.2 151 81.5
BolC2t08556H Brassica oleracea HOM05D003134 ORTHO05D003500 5.9e-50 201.1 150 77.3
C02p24530 Brassica napus HOM05D003134 ORTHO05D003500 2.5e-48 195.7 150 76.0
BcaB05g24377 Brassica carinata HOM05D003134 ORTHO05D003500 2.1e-47 192.6 150 74.7
A02p14980 Brassica napus HOM05D003134 ORTHO05D003500 4.7e-47 191.4 150 74.7
BraA02t06565Z Brassica rapa HOM05D003134 ORTHO05D003500 4.7e-47 191.4 150 74.7
A07p32020 Brassica napus HOM05D003134 ORTHO05D003500 2.3e-46 189.1 147 76.2
BraA07t30832Z Brassica rapa HOM05D003134 ORTHO05D003500 2.3e-46 189.1 147 76.2
BcaC08g45971 Brassica carinata HOM05D003134 ORTHO05D003500 2.6e-45 185.7 149 74.5
C06p37610 Brassica napus HOM05D003134 ORTHO05D003500 2.6e-45 185.7 149 74.5
BolC6t38864H Brassica oleracea HOM05D003134 ORTHO05D003500 2.6e-45 185.7 149 74.5
BcaB03g15416 Brassica carinata HOM05D003134 ORTHO05D003500 7.5e-45 184.1 147 74.1
Carub.0002s1492 Capsella rubella HOM05D003134 ORTHO05D003500 6.3e-44 181.0 154 78.6
CARHR061210 Cardamine hirsuta HOM05D003134 ORTHO05D003500 2.4e-43 179.1 152 77.0
AL2G27290 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 5.9e-42 174.5 148 75.7
AT1G68430 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 2.8e-36 155.6 148 68.2
Aa31LG4G14620 Aethionema arabicum HOM05D003134 ORTHO05D003500 3.5e-34 148.7 156 60.3
THA.LOC104808293 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 8.6e-33 144.1 165 57.6
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 9.8e-21 104.0 157 49.7
Cfa015852 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.7e-20 103.2 155 47.7
Cfa015849 Carpinus fangiana HOM05D003134 ORTHO05D003500 2.9e-20 102.4 156 48.7
Thecc.02G223300 Theobroma cacao HOM05D003134 ORTHO05D003500 1.9e-19 99.8 163 49.1
TWI31G0745 Tripterygium wilfordii HOM05D003134 ORTHO05D003500 7.0e-19 97.8 168 45.2
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 1.2e-18 97.1 145 44.8
Cpa.g.sc65.57 Carica papaya HOM05D003134 ORTHO05D003500 1.6e-18 96.7 169 49.7
Ciclev10016989m.g Citrus clementina HOM05D003134 ORTHO05D003500 2.1e-18 96.3 170 44.7
COL.COLO4_32156 Corchorus olitorius HOM05D003134 ORTHO05D003500 2.1e-18 96.3 166 44.6
Gohir.D02G171600 Gossypium hirsutum HOM05D003134 ORTHO05D003500 2.7e-18 95.9 161 43.5
Gorai.005G193000 Gossypium raimondii HOM05D003134 ORTHO05D003500 2.7e-18 95.9 161 43.5
Sabra10G0091400 Salix brachista HOM05D003134 ORTHO05D003500 3.5e-18 95.5 153 45.1
Duzib251G0591 Durio zibethinus HOM05D003134 ORTHO05D003500 4.6e-18 95.1 160 45.6
Lalb_Chr02g0145791 Lupinus albus HOM05D003134 ORTHO05D003500 7.8e-18 94.4 152 44.7
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 3.9e-17 92.0 146 44.5
CiPaw.05G241000 Carya illinoinensis HOM05D003134 ORTHO05D003500 5.0e-17 91.7 167 41.9
Gohir.A03G148500 Gossypium hirsutum HOM05D003134 ORTHO05D003500 6.6e-17 91.3 161 41.0
Manes.06G065600 Manihot esculenta HOM05D003134 ORTHO05D003500 8.6e-17 90.9 158 41.8
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 1.9e-16 89.7 162 42.0
Medtr1g110190 Medicago truncatula HOM05D003134 ORTHO05D003500 5.6e-16 88.2 148 47.3
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 2.1e-15 86.3 145 41.4
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 3.6e-15 85.5 160 41.2
Lj5g0013847 Lotus japonicus HOM05D003134 ORTHO05D003500 6.2e-15 84.7 163 44.2
Glyma.20G119200 Glycine max HOM05D003134 ORTHO05D003500 8.1e-15 84.3 145 44.1
Phvul.007G030600 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 8.1e-15 84.3 147 46.3
Psat6g225360 Pisum sativum HOM05D003134 ORTHO05D003500 8.1e-15 84.3 149 45.0
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 1.1e-14 84.0 148 42.6
FAN22G0900 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.4e-14 83.6 148 41.9
Duzib268G0372 Durio zibethinus HOM05D003134 ORTHO05D003500 1.8e-14 83.2 163 47.2
FAN12G3405 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.1e-14 82.4 147 41.5
Potri.010G121300 Populus trichocarpa HOM05D003134 ORTHO05D003500 3.1e-14 82.4 154 39.6
RcHm_v2.0_Chr4g0434621 Rosa chinensis HOM05D003134 ORTHO05D003500 4.0e-14 82.0 148 42.6
VMungo0720G1250 Vigna mungo HOM05D000260 ORTHO05D000318 4.0e-14 82.0 148 45.3
PGR119G2525 Punica granatum HOM05D003134 ORTHO05D003500 8.9e-14 80.9 153 43.1
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla HOM05D003134 ORTHO05D003500 1.2e-13 80.5 158 42.4
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 1.5e-13 80.1 169 38.5
CSS0042149 Camellia sinensis var. sinensis HOM05D003134 ORTHO05D003500 2.0e-13 79.7 165 38.8
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 2.0e-13 79.7 170 40.6
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 2.0e-13 79.7 152 41.4
TAR433G0003 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.0e-13 79.7 158 41.8
FAN07G2257 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.6e-13 79.3 142 43.0
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 2.6e-13 79.3 158 40.5
ClCG01G005860 Citrullus lanatus HOM05D003134 ORTHO05D003500 9.9e-13 77.4 161 40.4
DCAR_021449 Daucus carota HOM05D003134 ORTHO05D003500 9.9e-13 77.4 150 39.3
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 1.3e-12 77.0 162 39.5
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 1.3e-12 77.0 165 38.8
CANSAT01G0067 Cannabis sativa HOM05D003134 ORTHO05D003500 1.7e-12 76.6 177 37.3
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 2.2e-12 76.3 162 42.0
Prupe.3G146400 Prunus persica HOM05D003134 ORTHO05D003500 2.2e-12 76.3 170 40.6
Sc10g0001080 Simmondsia chinensis HOM05D003134 ORTHO05D003500 2.2e-12 76.3 161 42.9
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 3.7e-12 75.5 153 39.9
Sabra04G0066000 Salix brachista HOM05D003134 ORTHO05D003500 3.7e-12 75.5 150 39.3
Atru.chr1.1630 Acer truncatum HOM05D003134 ORTHO05D003500 4.9e-12 75.1 157 37.6
SalBow5G3107 Salvia bowleyana HOM05D003134 ORTHO05D003500 4.9e-12 75.1 154 40.3
SalBow5G4218 Salvia bowleyana HOM05D003134 ORTHO05D003500 4.9e-12 75.1 154 40.3
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 6.4e-12 74.7 160 38.1
Potri.017G117866 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.1e-11 73.9 151 43.0
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 1.4e-11 73.6 165 39.4
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 1.4e-11 73.6 163 38.0
Sed0007756 Sechium edule HOM05D003134 ORTHO05D003500 1.4e-11 73.6 160 40.0
ClCG11G007810 Citrullus lanatus HOM05D003134 ORTHO05D003500 3.2e-11 72.4 164 37.2
CsaV3_5G028830 Cucumis sativus L. HOM05D003134 ORTHO05D003500 3.2e-11 72.4 166 38.6
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 3.2e-11 72.4 161 38.5
MD17G1247700 Malus domestica HOM05D003134 ORTHO05D003500 4.1e-11 72.0 168 39.3
FAN03G2307 Fragaria x ananassa HOM05D003134 ORTHO05D003500 5.4e-11 71.6 163 39.3
FAN12G3727 Fragaria x ananassa HOM05D003134 ORTHO05D003500 5.4e-11 71.6 86 53.5
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 5.4e-11 71.6 161 41.0
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 7.1e-11 71.2 154 37.7
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 9.2e-11 70.9 154 39.0
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 1.2e-10 70.5 166 39.2
Lalb_Chr10g0091341 Lupinus albus HOM05D003134 ORTHO05D003500 1.2e-10 70.5 152 46.7
Potri.008G123800 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.2e-10 70.5 86 48.8
Actinidia17642 Actinidia chinensis HOM05D003134 ORTHO05D003500 1.6e-10 70.1 149 40.3
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 2.1e-10 69.7 166 36.7
PSO170G0811 Papaver somniferum HOM05D003134 ORTHO05D003500 2.1e-10 69.7 167 34.1
Sed0004988 Sechium edule HOM05D003134 ORTHO05D003500 2.1e-10 69.7 157 36.3
THA.LOC104823851 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 2.1e-10 69.7 162 38.3
CsaV3_2G033780 Cucumis sativus L. HOM05D003134 ORTHO05D003500 2.7e-10 69.3 173 37.6
FAN01G0579 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.7e-10 69.3 164 39.0
PGSC0003DMG400002449 Solanum tuberosum HOM05D003134 ORTHO05D003500 2.7e-10 69.3 175 36.6
A07p33710 Brassica napus HOM05D003134 ORTHO05D003500 3.5e-10 68.9 170 35.3
Potri.004G097200 Populus trichocarpa HOM05D003134 ORTHO05D003500 3.5e-10 68.9 151 40.4
PSO017G0284 Papaver somniferum HOM05D003134 ORTHO05D003500 4.6e-10 68.6 169 38.5
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 6.0e-10 68.2 167 36.5
MELO3C008147.2 Cucumis melo HOM05D003134 ORTHO05D003500 7.8e-10 67.8 166 38.6
Manes.02G070500 Manihot esculenta HOM05D003134 ORTHO05D003500 7.8e-10 67.8 157 36.3
Sp7g03820 Schrenkiella parvula HOM05D003134 ORTHO05D003500 7.8e-10 67.8 163 36.8
PGSC0003DMG400024380 Solanum tuberosum HOM05D003134 ORTHO05D003500 7.8e-10 67.8 175 36.0
RcHm_v2.0_Chr1g0326241 Rosa chinensis HOM05D003134 ORTHO05D003500 1.0e-09 67.4 178 36.5
Solyc03g034300.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 1.0e-09 67.4 162 38.3
Glyma.02G088600 Glycine max HOM05D003134 ORTHO05D003500 1.3e-09 67.0 160 44.4
Peaxi162Scf00104g00142 Petunia axillaris HOM05D003134 ORTHO05D003500 1.3e-09 67.0 147 40.1
FAN14G3652 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-09 66.6 162 38.9
FAN17G2365 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-09 66.6 147 38.1
FAN23G1965 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-09 66.6 165 40.0
Glyma.18G294900 Glycine max HOM05D003134 ORTHO05D003500 2.3e-09 66.2 158 41.8
MBI16_g37123_MAGBIO Magnolia biondii HOM05D003134 ORTHO05D003500 2.3e-09 66.2 155 34.8
Nitab4.5_0000753g0120 Nicotiana tabacum HOM05D003134 ORTHO05D003500 3.0e-09 65.9 91 48.4
Peaxi162Scf00394g00095 Petunia axillaris HOM05D003134 ORTHO05D003500 3.0e-09 65.9 94 47.9
TPR.G36596 Trifolium pratense HOM05D003134 ORTHO05D003500 3.0e-09 65.9 162 37.0
AUR62009019 Chenopodium quinoa HOM05D003134 ORTHO05D003500 3.9e-09 65.5 174 37.4
Sed0003377 Sechium edule HOM05D003134 ORTHO05D003500 3.9e-09 65.5 153 36.6
Ca_08085_v3 Cicer arietinum L. HOM05D003134 ORTHO05D003500 5.1e-09 65.1 161 37.9
Medtr7g082520 Medicago truncatula HOM05D003134 ORTHO05D003500 5.1e-09 65.1 161 34.8
Psat3g098080 Pisum sativum HOM05D003134 ORTHO05D003500 5.1e-09 65.1 164 36.6
BraA07t30998Z Brassica rapa HOM05D003134 ORTHO05D003500 6.6e-09 64.7 170 35.3
FAN10G2348 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.6e-09 64.7 164 38.4
FAN28G2684 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.6e-09 64.7 165 40.6
Oeu008433.1 Olea europaea HOM05D003134 ORTHO05D003500 6.6e-09 64.7 162 33.3
PGR004G0132 Punica granatum HOM05D003134 ORTHO05D003500 6.6e-09 64.7 165 38.2
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 6.6e-09 64.7 160 35.0
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 6.6e-09 64.7 160 35.0
VMungo1383G0351 Vigna mungo HOM05D003134 ORTHO05D003500 6.6e-09 64.7 161 41.6
Ah.16g101650 Amaranthus hybridus HOM05D003134 ORTHO05D003500 8.6e-09 64.3 165 33.3
AUR62023283 Chenopodium quinoa HOM05D003134 ORTHO05D003500 8.6e-09 64.3 174 34.5
Haze_14180 Corylus avellana HOM05D003134 ORTHO05D003500 8.6e-09 64.3 173 35.3
Manes.01G112200 Manihot esculenta HOM05D003134 ORTHO05D003500 1.1e-08 63.9 88 47.7
Sopen03g007090 Solanum pennellii HOM05D003134 ORTHO05D003500 1.1e-08 63.9 165 37.0
C06p43260 Brassica napus HOM05D003134 ORTHO05D003500 1.5e-08 63.5 170 34.7
MELO3C005343.2 Cucumis melo HOM05D003134 ORTHO05D003500 1.5e-08 63.5 168 38.1
Phvul.008G007800 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 1.9e-08 63.2 157 41.4
FAN10G3294 Fragaria x ananassa HOM05D000266 ORTHO05D000765 2.5e-08 62.8 164 38.4
Gohir.A11G165400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 2.5e-08 62.8 166 33.1
BcaC08g46122 Brassica carinata HOM05D003134 ORTHO05D003500 3.3e-08 62.4 170 34.7
HanXRQChr12g0375681 Helianthus annuus HOM05D003134 ORTHO05D003500 3.3e-08 62.4 158 33.5
FvH4_7g03610 Fragaria vesca HOM05D003134 ORTHO05D003500 4.3e-08 62.0 163 38.0
FAN06G4960 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.3e-08 62.0 163 38.0
Gohir.D11G171400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 4.3e-08 62.0 166 32.5
Gorai.007G183800 Gossypium raimondii HOM05D003134 ORTHO05D003500 4.3e-08 62.0 166 32.5
Lalb_Chr06g0165891 Lupinus albus HOM05D003134 ORTHO05D003500 4.3e-08 62.0 58 63.8
AT1G66890 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 5.6e-08 61.6 164 39.6
Lj1g0014230 Lotus japonicus HOM05D003134 ORTHO05D003500 5.6e-08 61.6 172 39.5
Nitab4.5_0000625g0110 Nicotiana tabacum HOM05D003134 ORTHO05D003500 5.6e-08 61.6 163 36.8
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 5.6e-08 61.6 97 46.4
unitig_0.g841 Utricularia gibba HOM05D003134 ORTHO05D003500 5.6e-08 61.6 143 32.2
FAN02G1640 Fragaria x ananassa HOM05D003134 ORTHO05D003500 7.3e-08 61.2 164 37.8
Lsat_1_v5_gn_2_81120 Lactuca sativa HOM05D003134 ORTHO05D003500 7.3e-08 61.2 161 36.0
Oeu036853.1 Olea europaea HOM05D003134 ORTHO05D003500 7.3e-08 61.2 160 31.9
Sp5g21880 Schrenkiella parvula HOM05D003134 ORTHO05D003500 7.3e-08 61.2 168 35.7
ATR1125G046 Amborella trichopoda HOM05D003134 ORTHO05D003500 9.5e-08 60.8 165 31.5
BcaB03g15220 Brassica carinata HOM05D003134 ORTHO05D003500 9.5e-08 60.8 169 37.3
Thhalv10019248m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 9.5e-08 60.8 167 32.3
FAN16G3541 Fragaria x ananassa HOM05D003134 ORTHO05D003500 9.5e-08 60.8 164 39.0
AL2G25140 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 1.6e-07 60.1 164 35.4
Nitab4.5_0015828g0010 Nicotiana tabacum HOM05D003134 ORTHO05D003500 2.1e-07 59.7 163 36.2
Migut.L00500 Erythranthe guttata HOM05D003134 ORTHO05D003500 3.6e-07 58.9 170 35.9
CiPaw.03G063500 Carya illinoinensis HOM05D003134 ORTHO05D003500 4.7e-07 58.5 185 35.7
Carub.0002s1311 Capsella rubella HOM05D003134 ORTHO05D003500 8.1e-07 57.8 168 38.1
Oeu030792.1 Olea europaea HOM05D000260 ORTHO05D000318 1.1e-06 57.4 60 56.7
QL02p049588 Quercus lobata HOM05D003134 ORTHO05D003500 1.1e-06 57.4 182 33.5
CiPaw.04G043700 Carya illinoinensis HOM05D003134 ORTHO05D003500 1.4e-06 57.0 173 32.4
EL10Ac2g04546 Beta vulgaris HOM05D003134 ORTHO05D003500 1.8e-06 56.6 173 32.9
THA.LOC104805579 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 2.4e-06 56.2 183 32.8
Duzib138G0856 Durio zibethinus HOM05D003134 ORTHO05D003500 4.0e-06 55.5 173 31.8
Cfa007900 Carpinus fangiana HOM05D003134 ORTHO05D003500 5.2e-06 55.1 176 35.2
BolC6t39113H Brassica oleracea HOM05D000464 ORTHO05D003500 6.8e-06 54.7 96 41.7
QL02p050634 Quercus lobata HOM05D003134 ORTHO05D003500 6.8e-06 54.7 183 32.2
FAN22G2289 Fragaria x ananassa HOM05D003134 ORTHO05D003500 8.9e-06 54.3 164 39.6


User provided reference genes

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