Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p34660 Brassica napus HOM05D009767 ORTHO05D011871 3.2e-309 1064.3 567 100.0
BraA07t31084Z Brassica rapa HOM05D009767 ORTHO05D011871 1.4e-283 979.2 615 87.5
BcaC08g46251 Brassica carinata HOM05D009767 ORTHO05D011871 2.8e-268 928.3 620 81.0
C06p41790 Brassica napus HOM05D009767 ORTHO05D011871 2.3e-254 882.1 616 78.4
BolC6t39249H Brassica oleracea HOM05D009767 ORTHO05D011871 2.3e-254 882.1 616 78.4
BcaB03g15114 Brassica carinata HOM05D009767 ORTHO05D011871 8.9e-182 641.0 598 66.1
Thhalv10019755m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 4.4e-80 303.1 870 30.8
Carub.0002s1470 Capsella rubella HOM05D009767 ORTHO05D011871 1.7e-76 291.2 717 35.4
Thhalv10019799m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 2.9e-76 290.4 428 44.6
AT1G68210 Arabidopsis thaliana HOM05D009767 ORTHO05D011871 1.2e-69 268.5 777 31.1
Sp5g23230 Schrenkiella parvula HOM05D009767 ORTHO05D011871 4.3e-67 260.0 745 32.3
Thhalv10019466m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 2.0e-64 251.1 824 30.6
AL2G27050 Arabidopsis lyrata HOM05D009767 ORTHO05D011871 7.8e-53 212.6 450 35.8
C06p41560 Brassica napus HOM05D009767 ORTHO05D011871 6.0e-45 186.4 309 37.2
A07p34810 Brassica napus HOM05D009767 ORTHO05D011871 8.6e-44 182.6 319 37.3
BolC6t39268H Brassica oleracea HOM05D009767 ORTHO05D011871 6.2e-42 176.4 296 36.8
BraA07t31099Z Brassica rapa HOM05D009767 ORTHO05D011871 6.8e-41 172.9 304 36.8
Sp3g29620 Schrenkiella parvula HOM05D009767 ORTHO05D011871 2.2e-39 167.9 470 31.5
Sp5g23430 Schrenkiella parvula HOM05D009767 ORTHO05D011871 1.1e-30 139.0 591 26.4
THA.LOC104801671 Tarenaya hassleriana HOM05D000196 ORTHO05D011871 1.9e-30 138.3 500 27.8
BcaC08g46288 Brassica carinata HOM05D009767 ORTHO05D011871 3.8e-23 114.0 358 30.2
A07p34820 Brassica napus HOM05D009767 ORTHO05D011871 1.4e-22 112.1 572 26.0
BraA07t31100Z Brassica rapa HOM05D009767 ORTHO05D011871 1.4e-22 112.1 572 26.0
C06p41550 Brassica napus HOM05D009767 ORTHO05D011871 2.4e-22 111.3 573 26.2
BolC6t39269H Brassica oleracea HOM05D009767 ORTHO05D011871 2.4e-22 111.3 573 26.2
BcaC08g46284 Brassica carinata HOM05D009767 ORTHO05D011871 3.2e-22 110.9 498 27.3
BcaB03g15809 Brassica carinata HOM05D009767 ORTHO05D011871 7.1e-22 109.8 495 25.5
Haze_00664 Corylus avellana HOM05D000196 ORTHO05D000279 2.6e-08 64.7 182 33.0
Manes.06G064200 Manihot esculenta HOM05D000196 ORTHO05D000279 2.6e-08 64.7 209 27.8
Duzib248G1184 Durio zibethinus HOM05D000196 ORTHO05D000279 7.6e-08 63.2 83 42.2
Dinv16150 Davidia involucrata HOM05D000196 ORTHO05D000279 1.0e-07 62.8 232 28.0
CsaV3_5G034680 Cucumis sativus L. HOM05D000196 ORTHO05D020475 1.3e-07 62.4 221 25.3
Cfa015826 Carpinus fangiana HOM05D000196 ORTHO05D015043 1.7e-07 62.0 140 32.9
FAN07G0195 Fragaria x ananassa HOM05D000196 ORTHO05D015043 1.7e-07 62.0 79 45.6
ClCG05G022410 Citrullus lanatus HOM05D000196 ORTHO05D020475 3.8e-07 60.8 223 26.9
QL01p003385 Quercus lobata HOM05D000196 ORTHO05D015043 3.8e-07 60.8 92 40.2
FAN12G2710 Fragaria x ananassa HOM05D000196 ORTHO05D015043 4.9e-07 60.5 158 33.5
FAN12G3607 Fragaria x ananassa HOM05D000196 ORTHO05D015043 4.9e-07 60.5 158 33.5
TWI31G1263 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 6.5e-07 60.1 118 33.9
MELO3C012282.2 Cucumis melo HOM05D000196 ORTHO05D020475 8.4e-07 59.7 210 26.7
TWI75G0272 Tripterygium wilfordii HOM05D000196 ORTHO05D013060 1.4e-06 58.9 118 32.2
PGSC0003DMG400004864 Solanum tuberosum HOM05D011918 ORTHO05D010161 3.2e-06 57.8 234 22.2
vmacro01408 Vaccinium macrocarpon HOM05D000196 ORTHO05D000279 3.2e-06 57.8 197 26.9
Dinv17522 Davidia involucrata HOM05D000196 ORTHO05D010161 4.2e-06 57.4 332 23.5
Dinv32420 Davidia involucrata HOM05D000196 ORTHO05D015545 7.1e-06 56.6 223 24.7
TWI79G0663 Tripterygium wilfordii HOM05D000196 ORTHO05D013060 7.1e-06 56.6 81 39.5


User provided reference genes

Program Settings