Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 2.3e-229 798.5 400 100.0
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 4.9e-227 790.8 400 98.8
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 1.8e-221 772.3 401 96.3
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 3.7e-219 764.6 400 95.0
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 4.9e-219 764.2 400 95.0
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 1.6e-217 759.2 401 95.0
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 2.3e-208 728.8 400 90.0
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 1.5e-207 726.1 398 90.7
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 4.8e-206 721.1 397 89.2
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 6.2e-206 720.7 400 88.2
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 1.4e-202 709.5 400 88.0
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 1.9e-202 709.1 400 87.8
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 1.3e-187 659.8 400 82.0
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 4.8e-182 641.3 400 78.5
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 3.7e-166 588.6 391 74.9
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 2.0e-164 582.8 391 73.1
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 8.5e-163 577.4 399 72.4
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 9.4e-162 573.9 394 73.1
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.6e-161 573.2 399 71.4
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.4e-160 570.1 391 72.9
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 6.7e-160 567.8 395 69.4
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 2.0e-159 566.2 394 71.8
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 5.3e-157 558.1 391 70.3
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 9.1e-157 557.4 399 69.7
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 2.0e-156 556.2 391 71.1
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 3.5e-156 555.4 391 70.6
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 4.5e-156 555.1 395 70.6
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 7.7e-156 554.3 391 70.8
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.7e-155 553.1 394 70.1
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 6.5e-155 551.2 396 67.2
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 1.5e-154 550.1 391 71.4
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 7.2e-154 547.7 394 68.3
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.1e-153 546.2 420 67.1
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 3.6e-153 545.4 419 67.3
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 4.7e-153 545.0 394 69.0
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 6.1e-153 544.7 394 69.0
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 8.0e-153 544.3 394 68.8
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.0e-152 543.9 381 71.9
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 1.8e-152 543.1 395 67.3
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 3.0e-152 542.3 395 68.6
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 5.2e-152 541.6 395 67.8
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 3.3e-151 538.9 396 66.7
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 3.3e-151 538.9 394 68.8
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 1.7e-150 536.6 398 67.6
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 4.8e-150 535.0 391 68.0
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 6.3e-150 534.6 451 62.1
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 8.2e-150 534.3 389 67.4
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 1.1e-149 533.9 410 65.6
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 1.1e-149 533.9 394 66.5
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 9.1e-149 530.8 384 68.0
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 9.1e-149 530.8 391 67.5
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 1.2e-148 530.4 394 67.5
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 2.0e-148 529.6 394 66.2
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 3.5e-148 528.9 472 59.5
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.3e-147 526.9 396 66.7
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 1.3e-147 526.9 394 67.3
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 5.0e-147 525.0 389 67.9
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 2.5e-146 522.7 391 67.0
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 2.3e-144 516.2 391 66.2
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 3.4e-143 512.3 396 63.4
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 4.8e-142 508.4 394 64.7
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.8e-141 506.5 395 64.3
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 3.1e-141 505.8 393 62.6
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 7.0e-141 504.6 399 64.2
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 1.2e-140 503.8 359 71.3
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 3.5e-140 502.3 394 62.7
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 7.7e-140 501.1 395 64.6
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 1.7e-139 500.0 393 62.8
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.9e-138 496.5 368 67.1
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 2.5e-138 496.1 395 61.3
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 4.2e-138 495.4 409 59.7
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.7e-137 492.7 428 60.5
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 6.1e-137 491.5 396 63.1
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.0e-136 490.7 426 60.1
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 8.8e-136 487.6 390 60.8
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.3e-134 483.8 381 63.3
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 9.2e-133 477.6 404 59.7
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 1.6e-132 476.9 393 60.6
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 8.0e-129 464.5 360 66.4
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 8.0e-129 464.5 333 69.4
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 2.9e-126 456.1 395 57.7
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 4.1e-125 452.2 506 50.6
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 4.3e-122 442.2 390 58.5
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 6.2e-121 438.3 384 59.9
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 1.4e-120 437.2 445 54.8
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.3e-118 430.6 435 55.2
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 2.5e-114 416.4 351 57.8
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 4.7e-113 412.1 399 54.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 6.6e-107 391.7 358 57.3
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 5.6e-106 388.7 316 60.1
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.3e-104 383.3 286 65.4
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 4.9e-102 375.6 275 65.8
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 1.3e-99 367.5 402 51.2
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.3e-99 366.7 297 64.3
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 3.3e-98 362.8 399 47.1
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 2.1e-97 360.1 394 47.2
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 6.6e-91 338.6 395 45.8
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.8e-89 333.2 249 69.1
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 5.8e-87 325.5 309 54.7
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 6.0e-84 315.5 238 68.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 6.6e-83 312.0 223 68.6
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 4.5e-79 299.3 486 36.8
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 2.3e-75 287.0 241 61.0
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 1.1e-74 284.6 370 41.6
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 1.2e-68 264.6 311 44.4
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 2.3e-67 260.4 203 65.5
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 7.4e-58 228.8 148 72.3
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 2.8e-41 173.7 535 26.7
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 1.5e-37 161.4 139 62.6
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.7e-36 156.4 119 65.5
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.7e-36 156.4 119 65.5
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.7e-36 156.4 119 65.5
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.0e-36 155.6 119 65.5
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.0e-35 155.2 119 64.7
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.0e-35 155.2 119 64.7
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.7e-33 147.9 106 67.0
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.7e-33 147.9 109 64.2
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 1.1e-32 145.2 109 65.1
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 1.1e-32 145.2 80 86.2
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.8e-32 144.4 109 62.4
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 2.7e-31 140.6 104 62.5
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 3.2e-29 133.7 174 43.7
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 9.4e-29 132.1 79 77.2
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.0e-27 128.6 81 74.1
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.5e-26 122.5 70 80.0
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 1.0e-22 112.1 113 50.4
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.5e-22 109.0 65 76.9
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 8.5e-22 109.0 65 76.9
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 1.5e-21 108.2 109 54.1
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.5e-21 107.5 65 75.4
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 4.2e-21 106.7 254 33.9
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.3e-19 100.9 65 73.8
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-18 98.2 65 70.8
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 2.6e-18 97.4 71 62.0
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 7.5e-18 95.9 60 75.0
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 1.3e-17 95.1 69 65.2
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.4e-16 90.9 109 45.0
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 5.4e-16 89.7 134 45.5
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 4.3e-13 80.1 54 70.4
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 6.1e-12 76.3 97 39.2
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 1.0e-11 75.5 65 60.0
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.3e-09 68.6 34 91.2
ClCG05G010860 Citrullus lanatus HOM05D002536 ORTHO05D006290 1.2e-07 62.0 43 65.1
TPR.G3472 Trifolium pratense HOM05D002536 ORTHO05D000008 1.0e-06 58.9 32 81.2


User provided reference genes

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