Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 1.5e-233 812.4 391 100.0
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 2.6e-225 785.0 389 96.9
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 2.7e-214 748.4 389 92.8
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-212 743.0 389 92.8
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.1e-212 743.0 389 92.8
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 4.8e-203 711.1 390 88.7
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 2.4e-194 682.2 390 83.8
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 6.5e-184 647.5 384 80.7
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 2.8e-179 632.1 388 78.6
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 1.7e-168 596.3 338 84.9
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.5e-156 556.6 311 87.1
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 3.5e-153 545.4 374 71.9
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.7e-145 519.2 381 69.3
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 8.6e-136 487.6 393 61.8
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 1.9e-135 486.5 329 72.9
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 4.4e-132 475.3 388 60.1
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 1.7e-131 473.4 392 60.7
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 6.4e-131 471.5 389 59.9
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 4.2e-130 468.8 379 62.3
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 1.2e-129 467.2 396 59.6
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.6e-129 466.8 387 61.2
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 8.7e-128 461.1 392 58.4
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.9e-127 459.9 395 58.0
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 3.3e-127 459.1 387 60.2
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.6e-126 456.8 385 58.7
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 4.8e-126 455.3 395 58.0
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 6.2e-126 454.9 393 58.3
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 8.1e-126 454.5 390 58.5
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 3.1e-125 452.6 390 55.9
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 5.3e-125 451.8 390 56.2
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 5.3e-125 451.8 387 57.4
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.5e-124 450.3 390 58.7
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.0e-124 449.9 385 57.9
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 5.8e-124 448.4 385 57.9
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 5.8e-124 448.4 390 55.9
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 9.9e-124 447.6 387 57.9
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 1.3e-123 447.2 381 59.1
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.2e-123 446.4 385 58.4
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 8.4e-123 444.5 401 57.4
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 8.4e-123 444.5 391 57.5
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.1e-122 444.1 395 56.5
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.9e-122 443.4 385 57.1
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 5.4e-122 441.8 385 57.1
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.1e-121 439.9 392 57.1
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 4.6e-121 438.7 390 56.2
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 5.1e-120 435.3 396 57.3
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 1.1e-119 434.1 379 58.6
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 4.3e-119 432.2 390 56.9
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.3e-118 430.6 385 55.1
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 1.3e-118 430.6 394 55.3
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 1.3e-118 430.6 394 56.1
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 2.1e-118 429.9 389 57.3
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 2.4e-117 426.4 394 56.6
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 3.1e-117 426.0 396 56.8
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 6.9e-117 424.9 390 55.1
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.0e-116 423.3 389 54.5
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.0e-116 423.3 383 55.9
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 4.5e-116 422.2 387 54.8
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 7.6e-116 421.4 323 64.7
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 3.8e-115 419.1 391 53.7
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.1e-114 417.5 392 53.8
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.1e-114 417.5 390 55.1
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 3.2e-114 416.0 380 55.8
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 7.1e-114 414.8 376 56.1
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 7.1e-114 414.8 383 54.6
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.2e-113 414.1 377 56.0
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 4.6e-113 412.1 393 52.7
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.8e-112 410.2 345 60.9
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 1.1e-111 407.5 405 51.4
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.1e-111 407.5 409 52.8
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 4.3e-111 405.6 273 75.8
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 8.1e-110 401.4 399 52.1
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 1.1e-109 401.0 399 52.4
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 1.5e-108 397.1 439 48.7
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 3.8e-107 392.5 387 52.5
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 4.6e-105 385.6 391 52.2
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.0e-104 382.9 395 52.2
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 6.7e-104 381.7 388 51.0
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.5e-103 380.6 442 47.3
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 5.7e-103 378.6 298 62.8
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 4.1e-101 372.5 373 53.9
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 2.9e-99 366.3 385 49.9
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.3e-94 350.9 392 47.7
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 1.2e-92 344.4 382 49.2
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.5e-92 344.0 406 48.0
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 8.5e-91 338.2 328 52.4
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.6e-89 334.0 297 54.2
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 5.7e-87 325.5 410 45.1
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.8e-85 320.5 231 65.4
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 3.1e-85 319.7 328 53.0
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 4.1e-85 319.3 282 57.8
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 7.7e-84 315.1 456 41.0
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.2e-83 313.5 387 45.5
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 2.7e-81 306.6 392 43.4
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 1.0e-80 304.7 311 51.4
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 9.1e-77 291.6 380 44.2
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 9.4e-66 255.0 276 48.9
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.1e-61 239.6 177 63.3
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-55 221.1 142 73.2
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 9.8e-55 218.4 293 43.7
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 2.0e-52 210.7 112 85.7
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 8.6e-51 205.3 273 46.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 1.9e-50 204.1 292 42.1
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 5.6e-50 202.6 113 81.4
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 7.3e-50 202.2 126 71.4
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.3e-48 197.2 254 43.3
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 3.0e-48 196.8 285 41.8
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 3.7e-46 189.9 150 60.7
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 3.9e-43 179.9 128 62.5
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 5.6e-42 176.0 205 44.4
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 7.3e-42 175.6 238 42.0
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 2.1e-41 174.1 102 75.5
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 8.9e-40 168.7 228 39.9
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.0e-35 155.2 93 78.5
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 3.9e-35 153.3 85 81.2
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.8e-33 147.1 119 63.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 1.1e-29 135.2 169 47.3
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 1.1e-29 135.2 169 47.3
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 1.4e-24 118.2 84 59.5
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 4.0e-24 116.7 135 47.4
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 5.8e-23 112.8 213 34.3
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.4e-21 108.2 63 77.8
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 7.8e-20 102.4 93 59.1
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 2.3e-19 100.9 102 49.0
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 2.3e-19 100.9 102 49.0
BolC2t08514H Brassica oleracea HOM05D005922 ORTHO05D006934 9.6e-18 95.5 143 42.0
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 4.7e-17 93.2 60 68.3
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 2.4e-16 90.9 113 46.9
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 3.1e-16 90.5 90 48.9
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 3.8e-14 83.6 49 75.5
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 4.9e-14 83.2 49 73.5
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 3.2e-13 80.5 50 68.0
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 1.4e-08 65.1 74 50.0
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 7.6e-07 59.3 84 35.7


User provided reference genes

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