Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p31770 Brassica napus HOM05D008861 ORTHO05D011066 1.9e-64 249.2 141 100.0
BraA07t30804Z Brassica rapa HOM05D008861 ORTHO05D011066 1.9e-64 249.2 141 100.0
BolC6t38828H Brassica oleracea HOM05D008861 ORTHO05D011066 2.5e-61 238.8 141 92.2
BcaC08g45929 Brassica carinata HOM05D008861 ORTHO05D011066 5.6e-61 237.7 141 91.5
C06p37250 Brassica napus HOM05D008861 ORTHO05D011066 5.6e-61 237.7 141 91.5
BcaC03g15002 Brassica carinata HOM05D008861 ORTHO05D011066 3.4e-42 175.3 139 74.1
BolC2t08614H Brassica oleracea HOM05D008861 ORTHO05D011066 3.4e-42 175.3 139 74.1
A02p15410 Brassica napus HOM05D008861 ORTHO05D011066 1.1e-40 170.2 140 72.1
BraA02t06602Z Brassica rapa HOM05D008861 ORTHO05D011066 1.1e-40 170.2 140 72.1
Thhalv10019276m.g Eutrema salsugineum HOM05D008861 ORTHO05D011066 1.4e-40 169.9 154 72.1
C02p25490 Brassica napus HOM05D008861 ORTHO05D011066 2.5e-40 169.1 139 71.9
BcaB03g15859 Brassica carinata HOM05D008861 ORTHO05D011066 5.5e-40 167.9 148 72.3
BcaB05g24420 Brassica carinata HOM05D008861 ORTHO05D011066 7.1e-40 167.5 145 71.7
AL2G27860 Arabidopsis lyrata HOM05D008861 ORTHO05D011066 1.3e-36 156.8 153 69.3
Sp5g23975 Schrenkiella parvula HOM05D008861 ORTHO05D011066 9.0e-35 150.6 151 66.2
Carub.0002s1545 Capsella rubella HOM05D008861 ORTHO05D011066 3.9e-30 135.2 150 64.0
AT1G68870 Arabidopsis thaliana HOM05D008861 ORTHO05D011066 4.3e-29 131.7 152 62.5
BcaC08g46339 Brassica carinata HOM05D008861 ORTHO05D011066 5.9e-26 121.3 145 60.7
C06p41000 Brassica napus HOM05D008861 ORTHO05D011066 5.9e-26 121.3 145 60.7
BolC6t39329H Brassica oleracea HOM05D008861 ORTHO05D011066 5.9e-26 121.3 145 60.7
A07p35260 Brassica napus HOM05D008861 ORTHO05D011066 9.4e-24 114.0 145 58.6
BraA07t31119Z Brassica rapa HOM05D008861 ORTHO05D011066 9.4e-24 114.0 145 58.6
CARHR025700 Cardamine hirsuta HOM05D008861 ORTHO05D011066 6.7e-22 107.8 150 54.7
A07p12790 Brassica napus HOM05D008861 ORTHO05D011066 5.7e-21 104.8 144 52.8
BraA07t29056Z Brassica rapa HOM05D008861 ORTHO05D011066 5.7e-21 104.8 144 52.8
BcaC06g35165 Brassica carinata HOM05D008861 ORTHO05D011066 1.7e-20 103.2 146 52.1
BolC7t42429H Brassica oleracea HOM05D008861 ORTHO05D011066 1.7e-20 103.2 146 52.1
AL1G39530 Arabidopsis lyrata HOM05D008861 ORTHO05D011066 8.2e-20 100.9 150 53.3
BcaB03g14059 Brassica carinata HOM05D008861 ORTHO05D011066 1.1e-19 100.5 147 54.4
AT1G26210 Arabidopsis thaliana HOM05D008861 ORTHO05D011066 1.4e-19 100.1 150 53.3
C07p19180 Brassica napus HOM05D008861 ORTHO05D011066 4.1e-19 98.6 147 49.7
Aa31LG7G8790 Aethionema arabicum HOM05D008861 ORTHO05D011066 1.2e-18 97.1 159 50.9
BcaC01g01718 Brassica carinata HOM05D008861 ORTHO05D011066 5.5e-16 88.2 144 51.4
C03p72600 Brassica napus HOM05D008861 ORTHO05D011066 5.5e-16 88.2 144 51.4
BolC3t19557H Brassica oleracea HOM05D008861 ORTHO05D011066 5.5e-16 88.2 144 51.4
CARHR061700 Cardamine hirsuta HOM05D008861 ORTHO05D011066 7.2e-16 87.8 135 56.3
BraA08t34668Z Brassica rapa HOM05D008861 ORTHO05D011066 2.1e-15 86.3 145 54.5
Carub.0001s2475 Capsella rubella HOM05D008861 ORTHO05D011066 7.9e-15 84.3 151 50.3
Sp1g22450 Schrenkiella parvula HOM05D008861 ORTHO05D011066 1.4e-14 83.6 140 50.0
A08p27230 Brassica napus HOM05D008861 ORTHO05D011066 2.6e-13 79.3 140 52.1
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 4.0e-06 55.5 83 45.8
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 6.7e-06 54.7 83 44.6


User provided reference genes

Program Settings