Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p31500 Brassica napus HOM05D009494 ORTHO05D011604 1.8e-60 235.7 121 100.0
BraA07t30782Z Brassica rapa HOM05D009494 ORTHO05D011604 1.2e-56 223.0 124 95.2
BcaC08g45881 Brassica carinata HOM05D009494 ORTHO05D011604 8.0e-56 220.3 124 93.5
BolC6t38790H Brassica oleracea HOM05D009494 ORTHO05D011604 8.0e-56 220.3 124 93.5
C06p36810 Brassica napus HOM05D009494 ORTHO05D011604 6.7e-55 217.2 124 92.7
BcaB03g15485 Brassica carinata HOM05D009494 ORTHO05D011604 8.0e-48 193.7 125 83.2
Sp5g24710 Schrenkiella parvula HOM05D009494 ORTHO05D011604 1.2e-35 153.3 125 69.6
BcaC03g15096 Brassica carinata HOM05D009494 ORTHO05D011604 2.0e-35 152.5 125 68.0
C02p26570 Brassica napus HOM05D009494 ORTHO05D011604 2.0e-35 152.5 125 68.0
BolC2t08728H Brassica oleracea HOM05D009494 ORTHO05D011604 2.0e-35 152.5 125 68.0
A02p15990 Brassica napus HOM05D009494 ORTHO05D011604 2.9e-34 148.7 125 67.2
BcaB05g24463 Brassica carinata HOM05D009494 ORTHO05D011604 6.1e-32 141.0 126 65.9
AT1G69588 Arabidopsis thaliana HOM05D009494 ORTHO05D011604 8.0e-32 140.6 125 61.6
Carub.0002s1626 Capsella rubella HOM05D009494 ORTHO05D011604 5.2e-31 137.9 125 62.4
Thhalv10019320m.g Eutrema salsugineum HOM05D009494 ORTHO05D011604 5.2e-31 137.9 126 65.9
BraA02t06659Z Brassica rapa HOM05D009494 ORTHO05D011604 4.4e-30 134.8 125 64.8
BcaB03g14731 Brassica carinata HOM05D009494 ORTHO05D011604 5.7e-30 134.4 125 64.8
A07p35950 Brassica napus HOM05D009494 ORTHO05D011604 1.4e-28 129.8 125 61.6
BraA07t31178Z Brassica rapa HOM05D009494 ORTHO05D011604 2.4e-28 129.0 125 61.6
BcaC08g46400 Brassica carinata HOM05D009494 ORTHO05D011604 1.7e-26 122.9 125 58.4
BcaNung06224 Brassica carinata HOM05D009494 ORTHO05D011604 1.7e-26 122.9 125 58.4
BolC6t39409H Brassica oleracea HOM05D009494 ORTHO05D011604 1.7e-26 122.9 125 58.4
Aa31LG4G11160 Aethionema arabicum HOM05D009494 ORTHO05D011604 3.0e-26 122.1 120 59.2
C06p43330 Brassica napus HOM05D009494 ORTHO05D011604 5.0e-26 121.3 119 59.7
CARHR062540 Cardamine hirsuta HOM05D009494 ORTHO05D011604 6.6e-26 120.9 125 56.8
THA.LOC104822126 Tarenaya hassleriana HOM05D009494 ORTHO05D011604 6.6e-18 94.4 120 46.7
DCAR_031024 Daucus carota HOM05D007096 ORTHO05D008288 3.3e-09 65.5 112 39.3
BcaC08g46401 Brassica carinata HOM05D009494 ORTHO05D011604 9.5e-09 63.9 71 53.5
C06p43340 Brassica napus HOM05D009494 ORTHO05D011604 9.5e-09 63.9 71 53.5
BolC6t39411H Brassica oleracea HOM05D009494 ORTHO05D011604 9.5e-09 63.9 71 53.5
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 9.5e-09 63.9 115 36.5
CSS0036898 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.2e-08 63.5 113 36.3
CSS0038022 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.2e-08 63.5 113 36.3
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.6e-08 63.2 115 35.7
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.1e-08 62.8 105 41.9
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 3.6e-08 62.0 77 48.1
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 8.1e-08 60.8 110 36.4
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.3e-07 59.3 75 41.3
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 4.0e-07 58.5 115 36.5
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 5.2e-07 58.2 105 35.2
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 5.2e-07 58.2 112 34.8
Potri.010G169300 Populus trichocarpa HOM05D007096 ORTHO05D008288 6.8e-07 57.8 110 35.5
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.5e-06 56.6 108 35.2
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 3.4e-06 55.5 73 42.5
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 4.4e-06 55.1 77 46.8
Sabra08G0063800 Salix brachista HOM05D007096 ORTHO05D008288 4.4e-06 55.1 116 32.8
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 5.8e-06 54.7 107 32.7
Sabra10G0129100 Salix brachista HOM05D007096 ORTHO05D008288 7.6e-06 54.3 115 34.8


User provided reference genes

Program Settings